RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 SCAMP4Q969E2 229 aa11.43□□□□□ -0.58
ATG3-209ENST00000496423 NTAN1Q96AB6 310 aa11.43□□□□□ -0.58
ATG3-209ENST00000496423 VPS50Q96JG6 964 aa11.43□□□□□ -0.58
ATG3-209ENST00000496423 MDFIQ99750 246 aa11.43□□□□□ -0.58
ATG3-209ENST00000496423 MAP3K3Q99759 626 aa11.43□□□□□ -0.58
ATG3-209ENST00000496423 ENKD1Q9H0I2 346 aa11.43□□□□□ -0.58
ATG3-209ENST00000496423 CXXC4Q9H2H0 198 aa11.43□□□□□ -0.58
ATG3-209ENST00000496423 SOHLH2Q9NX45 425 aa11.43□□□□□ -0.58
ATG3-209ENST00000496423 ZNF624Q9P2J8 865 aaPredicted RBP11.43□□□□□ -0.58
ATG3-209ENST00000496423 SH3BGRL2Q9UJC5 107 aa11.43□□□□□ -0.58
ATG3-209ENST00000496423 SERTAD3Q9UJW9 196 aa11.43□□□□□ -0.58
ATG3-209ENST00000496423 NEU3Q9UQ49 428 aa11.43□□□□□ -0.58
ATG3-209ENST00000496423 SIK3Q9Y2K2 1263 aa11.43□□□□□ -0.58
ATG3-209ENST00000496423 PCDHGC4Q9Y5F7 938 aa11.43□□□□□ -0.58
ATG3-209ENST00000496423 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.43□□□□□ -0.58
ATG3-209ENST00000496423 NPIPB15A6NHN6 443 aaPredicted RBP11.42□□□□□ -0.58
ATG3-209ENST00000496423 BECN2A8MW95 431 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 GPR89AB7ZAQ6 455 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 C19orf84I3L1E1 186 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 PSMA7O14818 248 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 NUAK1O60285 661 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 PMPCBO75439 489 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 UNC5CO95185 931 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 GNA14O95837 355 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 CRYABP02511 175 aaKnown RBP11.42□□□□□ -0.58
ATG3-209ENST00000496423 CAPN1P07384 714 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 GPR89BP0CG08 455 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 IDSP22304 550 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 LHCGRP22888 699 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 HTR7P34969 479 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 RORAP35398 523 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 HSPA9P38646 679 aaKnown RBP11.42□□□□□ -0.58
ATG3-209ENST00000496423 HALP42357 657 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 PAPOLAP51003 745 aaKnown RBP11.42□□□□□ -0.58
ATG3-209ENST00000496423 IST1P53990 364 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 CSNK1G2P78368 415 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 FOLH1Q04609 750 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 FOXD4L6Q3SYB3 417 aaPredicted RBP11.42□□□□□ -0.58
ATG3-209ENST00000496423 ARMC12Q5T9G4 340 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 MLIPQ5VWP3 458 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 FAM198BQ6UWH4 519 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 FOXD4L3Q6VB84 417 aaPredicted RBP11.42□□□□□ -0.58
ATG3-209ENST00000496423 SPOCD1Q6ZMY3 1216 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 CXXC5Q7LFL8 322 aaKnown RBP11.42□□□□□ -0.58
ATG3-209ENST00000496423 OR1N1Q8NGS0 311 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 NINJ1Q92982 152 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 NACC2Q96BF6 587 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 PTERQ96BW5 349 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 RIOK2Q9BVS4 552 aaKnown RBP11.42□□□□□ -0.58
ATG3-209ENST00000496423 SEC14L3Q9UDX4 400 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 RCOR1Q9UKL0 485 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 PTRH2Q9Y3E5 179 aaKnown RBP11.42□□□□□ -0.58
ATG3-209ENST00000496423 CSAG2Q9Y5P2 127 aa11.42□□□□□ -0.58
ATG3-209ENST00000496423 KMOO15229 486 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 NEFLP07196 543 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 MYBL2P10244 700 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 VCLP18206 1134 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 DNAJA1P31689 397 aaKnown RBP11.41□□□□□ -0.58
ATG3-209ENST00000496423 PPP1R2P41236 205 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 PTPN9P43378 593 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 IL10RBQ08334 325 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 LONRF1Q17RB8 773 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 C15orf59Q2T9L4 293 aaPredicted RBP11.41□□□□□ -0.58
ATG3-209ENST00000496423 TDRD12Q587J7 1177 aaKnown RBP11.41□□□□□ -0.58
ATG3-209ENST00000496423 RALGPS1Q5JS13 557 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 PRAMEF13Q5VWM6 474 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 CES4AQ5XG92 561 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 ZNF324BQ6AW86 544 aaPredicted RBP11.41□□□□□ -0.58
ATG3-209ENST00000496423 ABRAXAS1Q6UWZ7 409 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 B4GALNT4Q76KP1 1039 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 TMEM200AQ86VY9 491 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 CCDC185Q8N715 623 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 EMC1Q8N766 993 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 DNAJB8Q8NHS0 232 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 EPS8L1Q8TE68 723 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 RXFP2Q8WXD0 754 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 PSKH2Q96QS6 385 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 LRRC19Q9H756 370 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 METTL5Q9NRN9 209 aaKnown RBP11.41□□□□□ -0.58
ATG3-209ENST00000496423 SEMA3GQ9NS98 782 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 PCMTD2Q9NV79 361 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 SCHIP1Q9P0W5 487 aaPredicted RBP11.41□□□□□ -0.58
ATG3-209ENST00000496423 NDOR1Q9UHB4 597 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 HPSEQ9Y251 543 aa11.41□□□□□ -0.58
ATG3-209ENST00000496423 TRIM49BA6NDI0 452 aa11.4□□□□□ -0.58
ATG3-209ENST00000496423 AGPSO00116 658 aa11.4□□□□□ -0.58
ATG3-209ENST00000496423 VEGFDO43915 354 aa11.4□□□□□ -0.58
ATG3-209ENST00000496423 CYP11B1P15538 503 aa11.4□□□□□ -0.58
ATG3-209ENST00000496423 DESP17661 470 aa11.4□□□□□ -0.58
ATG3-209ENST00000496423 CDH5P33151 784 aaPredicted RBP11.4□□□□□ -0.58
ATG3-209ENST00000496423 TDGF1P3P51864 188 aa11.4□□□□□ -0.58
ATG3-209ENST00000496423 PMS1P54277 932 aaKnown RBP11.4□□□□□ -0.58
ATG3-209ENST00000496423 EPHB1P54762 984 aa11.4□□□□□ -0.58
ATG3-209ENST00000496423 AIF1P55008 147 aa11.4□□□□□ -0.58
ATG3-209ENST00000496423 PTSQ03393 145 aa11.4□□□□□ -0.58
ATG3-209ENST00000496423 LBRQ14739 615 aaKnown RBP11.4□□□□□ -0.58
ATG3-209ENST00000496423 SEPT7Q16181 437 aaKnown RBP11.4□□□□□ -0.58
ATG3-209ENST00000496423 CCDC14Q49A88 953 aa11.4□□□□□ -0.58
ATG3-209ENST00000496423 LRRC66Q68CR7 880 aa11.4□□□□□ -0.58
ATG3-209ENST00000496423 TRNP1Q6NT89 227 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms