RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 SFTPCP11686 197 aa14.19□□□□□ -0.14
CXCL12-208ENST00000496375 F3P13726 295 aa14.19□□□□□ -0.14
CXCL12-208ENST00000496375 LIFP15018 202 aa14.19□□□□□ -0.14
CXCL12-208ENST00000496375 ZNF8P17098 575 aaPredicted RBP14.19□□□□□ -0.14
CXCL12-208ENST00000496375 ITGB6P18564 788 aa14.19□□□□□ -0.14
CXCL12-208ENST00000496375 NFKB1P19838 968 aa14.19□□□□□ -0.14
CXCL12-208ENST00000496375 NFKB2Q00653 900 aa14.19□□□□□ -0.14
CXCL12-208ENST00000496375 ZNF648Q5T619 568 aaPredicted RBP14.19□□□□□ -0.14
CXCL12-208ENST00000496375 DARS2Q6PI48 645 aaKnown RBP14.19□□□□□ -0.14
CXCL12-208ENST00000496375 KDELC1Q6UW63 502 aa14.19□□□□□ -0.14
CXCL12-208ENST00000496375 PHYKPLQ8IUZ5 450 aa14.19□□□□□ -0.14
CXCL12-208ENST00000496375 CACNA2D3Q8IZS8 1091 aa14.19□□□□□ -0.14
CXCL12-208ENST00000496375 GPR26Q8NDV2 337 aa14.19□□□□□ -0.14
CXCL12-208ENST00000496375 SPATA13Q96N96 652 aa14.19□□□□□ -0.14
CXCL12-208ENST00000496375 GORASP1Q9BQQ3 440 aa14.19□□□□□ -0.14
CXCL12-208ENST00000496375 SLC12A9Q9BXP2 914 aa14.19□□□□□ -0.14
CXCL12-208ENST00000496375 OR2AG1Q9H205 316 aa14.19□□□□□ -0.14
CXCL12-208ENST00000496375 ZFYVE1Q9HBF4 777 aa14.19□□□□□ -0.14
CXCL12-208ENST00000496375 KLHL8Q9P2G9 620 aaPredicted RBP14.19□□□□□ -0.14
CXCL12-208ENST00000496375 ATXN10Q9UBB4 475 aa14.19□□□□□ -0.14
CXCL12-208ENST00000496375 SHOC2Q9UQ13 582 aa14.19□□□□□ -0.14
CXCL12-208ENST00000496375 KIR2DS5A0A0G2JLQ3 304 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 A0A0G2JNG1 304 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 KIR2DS3K7RE56 304 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 KCNN4O15554 427 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 STK10O94804 968 aaKnown RBP14.18□□□□□ -0.14
CXCL12-208ENST00000496375 SLC25A14O95258 325 aaPredicted RBP14.18□□□□□ -0.14
CXCL12-208ENST00000496375 EPOP01588 193 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 FGGP02679 453 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 STIP1P31948 543 aaKnown RBP14.18□□□□□ -0.14
CXCL12-208ENST00000496375 EPHA4P54764 986 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 KCNC4Q03721 635 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 KIR2DS5Q14953 304 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 CLCA4Q14CN2 919 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 PCSK7Q16549 785 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 CCNG2Q16589 344 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 ANKRD20A2Q5SQ80 823 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 ANKRD20A1Q5TYW2 823 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 ANKRD20A3Q5VUR7 823 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 ITPRIPL1Q6GPH6 555 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 PID1Q7Z2X4 250 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 ARHGAP22Q7Z5H3 698 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 OXNAD1Q96HP4 312 aaPredicted RBP14.18□□□□□ -0.14
CXCL12-208ENST00000496375 PPP1R2P1Q96PQ5 205 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 TEFMQ96QE5 360 aaKnown RBP14.18□□□□□ -0.14
CXCL12-208ENST00000496375 CTRCQ99895 268 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 FAM118BQ9BPY3 351 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 TBC1D10AQ9BXI6 508 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.18□□□□□ -0.14
CXCL12-208ENST00000496375 TRIM4Q9C037 500 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 OSGEPL1Q9H4B0 414 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 CLMPQ9H6B4 373 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 C10orf88Q9H8K7 445 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 PRDM8Q9NQV8 689 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 KLC4Q9NSK0 619 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 CPNE7Q9UBL6 633 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 KLHL3Q9UH77 587 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 FAM153AQ9UHL3 310 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 PILRAQ9UKJ1 303 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 SNX12Q9UMY4 172 aa14.18□□□□□ -0.14
CXCL12-208ENST00000496375 LOC285095A0A1B0GVY8 99 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 OR5K4A6NMS3 321 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 WISP1O95388 367 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 MT-CYBP00156 380 aaPredicted RBP14.17□□□□□ -0.14
CXCL12-208ENST00000496375 DCDC1P59894 354 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 UBE2IP63279 158 aaKnown RBP14.17□□□□□ -0.14
CXCL12-208ENST00000496375 MC2RQ01718 297 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 CDK18Q07002 472 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 MPP3Q13368 585 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 PLA2G4EQ3MJ16 856 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 PAPD7Q5XG87 772 aaKnown RBP14.17□□□□□ -0.14
CXCL12-208ENST00000496375 CRTC3Q6UUV7 619 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 TMC3Q7Z5M5 1100 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 ADGRG6Q86SQ4 1221 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 TRAM1L1Q8N609 369 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 AVL9Q8NBF6 648 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 SPATA22Q8NHS9 363 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 ACTRT1Q8TDG2 376 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 ATG4AQ8WYN0 398 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 GLYATL1Q969I3 302 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 OSBPL9Q96SU4 736 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 ZSCAN5AQ9BUG6 496 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 GPR63Q9BZJ6 419 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 MAGEE1Q9HCI5 957 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 TRIM39Q9HCM9 518 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 HOMER3Q9NSC5 361 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 ZNF711Q9Y462 761 aa14.17□□□□□ -0.14
CXCL12-208ENST00000496375 LILRA5A6NI73 299 aa14.16□□□□□ -0.14
CXCL12-208ENST00000496375 ZNF891A8MT65 544 aaPredicted RBP14.16□□□□□ -0.14
CXCL12-208ENST00000496375 CEP104O60308 925 aa14.16□□□□□ -0.14
CXCL12-208ENST00000496375 PPFIA2O75334 1257 aa14.16□□□□□ -0.14
CXCL12-208ENST00000496375 ANXA9O76027 345 aa14.16□□□□□ -0.14
CXCL12-208ENST00000496375 NDST3O95803 873 aa14.16□□□□□ -0.14
CXCL12-208ENST00000496375 CXCR5P32302 372 aa14.16□□□□□ -0.14
CXCL12-208ENST00000496375 CLCNKAP51800 687 aa14.16□□□□□ -0.14
CXCL12-208ENST00000496375 GDF10P55107 478 aa14.16□□□□□ -0.14
CXCL12-208ENST00000496375 INSCQ1MX18 579 aa14.16□□□□□ -0.14
CXCL12-208ENST00000496375 P3H1Q32P28 736 aa14.16□□□□□ -0.14
CXCL12-208ENST00000496375 PDPK2PQ6A1A2 396 aa14.16□□□□□ -0.14
CXCL12-208ENST00000496375 BORAQ6PGQ7 559 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms