RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 TMEM151AQ8N4L1 468 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 MDGA1Q8NFP4 955 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 BRSK1Q8TDC3 778 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 WBP2Q969T9 261 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 PLEKHG4BQ96PX9 1271 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 MTG2Q9H4K7 406 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 RNF186Q9NXI6 227 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 MOSPD1Q9UJG1 213 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 DNMT3LQ9UJW3 386 aa13.31□□□□□ -0.28
GPC1-209ENST00000495100 DFNA5O60443 496 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 RTN3O95197 1032 aaPredicted RBP13.3□□□□□ -0.28
GPC1-209ENST00000495100 CST1P01037 141 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 COL6A2P12110 1019 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 CKBP12277 381 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 POU1F1P28069 291 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 HNF4AP41235 474 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 STK19P49842 368 aaPredicted RBP13.3□□□□□ -0.28
GPC1-209ENST00000495100 AIF1P55008 147 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 HECTD3Q5T447 861 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 KDELC1Q6UW63 502 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 BHLHA9Q7RTU4 235 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 BEND7Q8N7W2 519 aaPredicted RBP13.3□□□□□ -0.28
GPC1-209ENST00000495100 CD99L2Q8TCZ2 262 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 MTERF1Q99551 399 aaKnown RBP13.3□□□□□ -0.28
GPC1-209ENST00000495100 KIF17Q9P2E2 1029 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 SAP18O00422 153 aaKnown RBP13.3□□□□□ -0.28
GPC1-209ENST00000495100 TMCC1O94876 653 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 H6PDO95479 791 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 FTH1P02794 183 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 FGF1P05230 155 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 HSMCR30P0CW71 290 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 ZNF182P17025 639 aaPredicted RBP13.3□□□□□ -0.28
GPC1-209ENST00000495100 POLR2IP36954 125 aaKnown RBP13.3□□□□□ -0.28
GPC1-209ENST00000495100 RAB41Q5JT25 222 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 GRAMD4Q6IC98 578 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 RTN4RL1Q86UN2 441 aaPredicted RBP13.3□□□□□ -0.28
GPC1-209ENST00000495100 IFNL1Q8IU54 200 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 OR52J3Q8NH60 311 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 SELENOMQ8WWX9 145 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 DLG3Q92796 817 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 TMEM169Q96HH4 297 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 ADGRE3Q9BY15 652 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 ELOVL6Q9H5J4 265 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 MRPL40Q9NQ50 206 aaKnown RBP13.3□□□□□ -0.28
GPC1-209ENST00000495100 TREX1Q9NSU2 369 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 SH3BP4Q9P0V3 963 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 ADGRE2Q9UHX3 823 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 DOCK1Q14185 1865 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 RBM47A0AV96 593 aaKnown RBP13.3□□□□□ -0.28
GPC1-209ENST00000495100 MTMR11A4FU01 709 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 PSMB9P28065 219 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 MTHFRP42898 656 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 SERINC3Q13530 473 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 SELPLGQ14242 412 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 RFLNAQ6ZTI6 216 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 CYS1Q717R9 158 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 FOXJ1Q92949 421 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 FAM120BQ96EK7 910 aaKnown RBP13.3□□□□□ -0.28
GPC1-209ENST00000495100 TUBB1Q9H4B7 451 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 CXorf21Q9HAI6 301 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 CLK4Q9HAZ1 481 aaKnown RBP13.3□□□□□ -0.28
GPC1-209ENST00000495100 OPTCQ9UBM4 332 aa13.3□□□□□ -0.28
GPC1-209ENST00000495100 ACSL4O60488 711 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 UGT2B4P06133 528 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 CHRM5P08912 532 aaPredicted RBP13.29□□□□□ -0.28
GPC1-209ENST00000495100 LEPRP48357 1165 aaKnown RBP13.29□□□□□ -0.28
GPC1-209ENST00000495100 STC1P52823 247 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 ACLYP53396 1101 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 MCCD1P59942 119 aaPredicted RBP13.29□□□□□ -0.28
GPC1-209ENST00000495100 VEPH1Q14D04 833 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 CRY1Q16526 586 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 RFTN2Q52LD8 501 aaPredicted RBP13.29□□□□□ -0.28
GPC1-209ENST00000495100 ZNF467Q7Z7K2 595 aaPredicted RBP13.29□□□□□ -0.28
GPC1-209ENST00000495100 SERPINA9Q86WD7 417 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 FBXO22Q8NEZ5 403 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 OR4F6Q8NGB9 312 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 OR52E6Q96RD3 313 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 SLC22A12Q96S37 553 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 FANCEQ9HB96 536 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.29□□□□□ -0.28
GPC1-209ENST00000495100 UTS2RQ9UKP6 389 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 ZNF490Q9ULM2 529 aaPredicted RBP13.29□□□□□ -0.28
GPC1-209ENST00000495100 ZNF451Q9Y4E5 1061 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 SNX5Q9Y5X3 404 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 SEPT4O43236 478 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 SMAD6O43541 496 aaKnown RBP13.29□□□□□ -0.28
GPC1-209ENST00000495100 CYP2C18P33260 490 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 RPS6KA3P51812 740 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 INHBCP55103 352 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 NAA20P61599 178 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 SPANXN4Q5MJ08 99 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 FAM171BQ6P995 826 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 ADGRG2Q8IZP9 1017 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 MUS81Q96NY9 551 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 SGIP1Q9BQI5 828 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 RNF11Q9Y3C5 154 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 CACNA1CQ13936 2221 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 ULK1O75385 1050 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 IL1BP01584 269 aa13.29□□□□□ -0.28
GPC1-209ENST00000495100 POU2F1P14859 743 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms