RNA–Protein interactions for RNA: ENST00000495090.6

SYNE1-230, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 1,907 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-230ENST00000495090 UGT2B10P36537 528 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 CHRNA4P43681 627 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 SERPINH1P50454 418 aaKnown RBP9.58□□□□□ -0.88
SYNE1-230ENST00000495090 ST13P50502 369 aaKnown RBP9.58□□□□□ -0.88
SYNE1-230ENST00000495090 UFM1P61960 85 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 TUBA1BP68363 451 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 CCNA1P78396 465 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 PRKG2Q13237 762 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 CDK5R2Q13319 367 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 RAB41Q5JT25 222 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 NOL9Q5SY16 702 aaKnown RBP9.58□□□□□ -0.88
SYNE1-230ENST00000495090 KDELC1Q6UW63 502 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 DLEU7Q6UYE1 221 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 TUBA1AQ71U36 451 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 NECAB2Q7Z6G3 386 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 SNX29P2Q8IUI4 249 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 OR5K1Q8NHB7 308 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 PEX13Q92968 403 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 CLSTN3Q9BQT9 956 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 NDEL1Q9GZM8 345 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 TKTL2Q9H0I9 626 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 FAM49AQ9H0Q0 323 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-230ENST00000495090 MMP27Q9H306 513 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 MAGIXQ9H6Y5 334 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 CCNB1IP1Q9NPC3 277 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 RGS18Q9NS28 235 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 OSER1Q9NX31 292 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 BTRCQ9Y297 605 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 AP3M1Q9Y2T2 418 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 TPRKBQ9Y3C4 175 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 V9GYQ6 96 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 WDR90Q96KV7 1748 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 MROH6A6NGR9 719 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 DFFAO00273 331 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 PPP6CO00743 305 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 STX16O14662 325 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 PMPCBO75439 489 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 SIX3O95343 332 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-230ENST00000495090 KRT75O95678 551 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 MLYCDO95822 493 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 CST1P01037 141 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 HLA-DQB2P05538 268 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 UROSP10746 265 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 ZNF37AP17032 561 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-230ENST00000495090 RCVRNP35243 200 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 BMPR1AP36894 532 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 WNT3AP56704 352 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 ARPC4P59998 168 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 SLC35A2P78381 396 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 PCBP1Q15365 356 aaKnown RBP eCLIP9.58□□□□□ -0.88
SYNE1-230ENST00000495090 PFKFB4Q16877 469 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 PLEKHG6Q3KR16 790 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 PLA2G4EQ3MJ16 856 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 ANKS6Q68DC2 871 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 OSTM1Q86WC4 334 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 DCP2Q8IU60 420 aaKnown RBP9.58□□□□□ -0.88
SYNE1-230ENST00000495090 GALNT13Q8IUC8 556 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 ADHFE1Q8IWW8 467 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 EID3Q8N140 333 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 MCOLN3Q8TDD5 553 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 GIPC2Q8TF65 315 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 FATE1Q969F0 183 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 KCNA7Q96RP8 456 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 OR2B2Q9GZK3 357 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 SPATC1LQ9H0A9 340 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 SLC25A51Q9H1U9 297 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 SMURF2Q9HAU4 748 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 HEBP1Q9NRV9 189 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 SLAMF8Q9P0V8 285 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 USP22Q9UPT9 525 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 PCDHGA10Q9Y5H3 936 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 ORC6Q9Y5N6 252 aa9.58□□□□□ -0.88
SYNE1-230ENST00000495090 MAGED1Q9Y5V3 778 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-230ENST00000495090 PSMD11O00231 422 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 BCKDKO14874 412 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 AXIN1O15169 862 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 CRCPO75575 148 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 ANGPTL1O95841 491 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 CYP11A1P05108 521 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 KCNE1P15382 129 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 RPS12P25398 132 aaKnown RBP9.57□□□□□ -0.88
SYNE1-230ENST00000495090 CD6P30203 668 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 HOXA11P31270 313 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-230ENST00000495090 CASP3P42574 277 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 ACVR1Q04771 509 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 PIGFQ07326 219 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 PWP1Q13610 501 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 KEAP1Q14145 624 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 CLCA4Q14CN2 919 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 OR4D1Q15615 310 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 XKR4Q5GH76 650 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 FAM219BQ5XKK7 198 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 AFMIDQ63HM1 303 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 ARHGAP36Q6ZRI8 547 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 PIM3Q86V86 326 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 HIPK1Q86Z02 1210 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 ELMOD1Q8N336 334 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 SDR16C5Q8N3Y7 309 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 OR52K2Q8NGK3 314 aa9.57□□□□□ -0.88
SYNE1-230ENST00000495090 GPR150Q8NGU9 434 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms