RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 IGHV5-51A0A0C4DH38 117 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 UBA6A0AVT1 1052 aaPredicted RBP13.98□□□□□ -0.17
VARS-228ENST00000495010 DPM1O60762 260 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 JCHAINP01591 159 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 BRAFP15056 766 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 FOLR1P15328 257 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 VARSP26640 1264 aaKnown RBP13.98□□□□□ -0.17
VARS-228ENST00000495010 DPYSL3Q14195 570 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 KCNAB1Q14722 419 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 PLCL1Q15111 1095 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 INPP5JQ15735 1006 aaPredicted RBP13.98□□□□□ -0.17
VARS-228ENST00000495010 ZFYVE27Q5T4F4 411 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 CCDC70Q6NSX1 233 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 TRAPPC5Q8IUR0 188 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 TMEM126BQ8IUX1 230 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 TTC30BQ8N4P2 665 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 PRR7Q8TB68 274 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 FAM71BQ8TC56 605 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 MR1Q95460 341 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 SLC41A2Q96JW4 573 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 RUFY1Q96T51 708 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 THAP2Q9H0W7 228 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 MAGEE1Q9HCI5 957 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 FGF21Q9NSA1 209 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 PCDHGB7Q9Y5F8 929 aa13.98□□□□□ -0.17
VARS-228ENST00000495010 SPTBN1Q01082 2364 aaKnown RBP13.98□□□□□ -0.17
VARS-228ENST00000495010 TNRC6AQ8NDV7 1962 aaKnown RBP13.97□□□□□ -0.17
VARS-228ENST00000495010 CPNE3O75131 537 aaKnown RBP13.97□□□□□ -0.17
VARS-228ENST00000495010 SORBS2O94875 1100 aaKnown RBP13.97□□□□□ -0.17
VARS-228ENST00000495010 KLK3P07288 261 aaPredicted RBP13.97□□□□□ -0.17
VARS-228ENST00000495010 MMP2P08253 660 aa13.97□□□□□ -0.17
VARS-228ENST00000495010 PIRTP0C851 137 aa13.97□□□□□ -0.17
VARS-228ENST00000495010 EBLN1P0CF75 366 aa13.97□□□□□ -0.17
VARS-228ENST00000495010 PDK2Q15119 407 aa13.97□□□□□ -0.17
VARS-228ENST00000495010 EIF2S3LQ2VIR3 472 aaKnown RBP13.97□□□□□ -0.17
VARS-228ENST00000495010 DNTTIP2Q5QJE6 756 aaKnown RBP13.97□□□□□ -0.17
VARS-228ENST00000495010 RBM43Q6ZSC3 357 aaKnown RBP13.97□□□□□ -0.17
VARS-228ENST00000495010 TMC3Q7Z5M5 1100 aa13.97□□□□□ -0.17
VARS-228ENST00000495010 KMT5CQ86Y97 462 aa13.97□□□□□ -0.17
VARS-228ENST00000495010 EID2BQ96D98 161 aa13.97□□□□□ -0.17
VARS-228ENST00000495010 ZNF514Q96K75 400 aaPredicted RBP13.97□□□□□ -0.17
VARS-228ENST00000495010 ZNF670Q9BS34 389 aa13.97□□□□□ -0.17
VARS-228ENST00000495010 AKIRIN1Q9H9L7 192 aaPredicted RBP13.97□□□□□ -0.17
VARS-228ENST00000495010 RTN4Q9NQC3 1192 aaKnown RBP13.97□□□□□ -0.17
VARS-228ENST00000495010 ZNF711Q9Y462 761 aa13.97□□□□□ -0.17
VARS-228ENST00000495010 NOTCH2Q04721 2471 aa13.97□□□□□ -0.17
VARS-228ENST00000495010 KCNK1O00180 336 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 KCNJ13O60928 360 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 SCRG1O75711 98 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 FECHP22830 423 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 PPP1CAP62136 330 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 HSD11B2P80365 405 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 IL10RAQ13651 578 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 PCSK7Q16549 785 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 ATP13A4Q4VNC1 1196 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 TMTC4Q5T4D3 741 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 E4F1Q66K89 784 aaPredicted RBP13.96□□□□□ -0.17
VARS-228ENST00000495010 ARMC6Q6NXE6 501 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 JMJD6Q6NYC1 403 aaPredicted RBP13.96□□□□□ -0.17
VARS-228ENST00000495010 HPS6Q86YV9 775 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 ZNF547Q8IVP9 402 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 RHOT1Q8IXI2 618 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 BRSK1Q8TDC3 778 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 HDAC11Q96DB2 347 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 SRPK1Q96SB4 655 aaKnown RBP13.96□□□□□ -0.17
VARS-228ENST00000495010 MAP3K3Q99759 626 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 MFRPQ9BY79 579 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 NAT10Q9H0A0 1025 aaKnown RBP13.96□□□□□ -0.17
VARS-228ENST00000495010 HSD3B7Q9H2F3 369 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 CBX8Q9HC52 389 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 MLXIPLQ9NP71 852 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 KCND1Q9NSA2 647 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 LMBRD1Q9NUN5 540 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 LUZP4Q9P127 313 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 NFKBIL1Q9UBC1 381 aaPredicted RBP13.96□□□□□ -0.17
VARS-228ENST00000495010 SNX7Q9UNH6 387 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 WDR37Q9Y2I8 494 aa13.96□□□□□ -0.17
VARS-228ENST00000495010 UTP20O75691 2785 aaKnown RBP13.96□□□□□ -0.17
VARS-228ENST00000495010 TLCD2A6NGC4 264 aa13.95□□□□□ -0.18
VARS-228ENST00000495010 TCP11X1B4DZS4 312 aa13.95□□□□□ -0.18
VARS-228ENST00000495010 BPIP17213 487 aa13.95□□□□□ -0.18
VARS-228ENST00000495010 LPOP22079 712 aaPredicted RBP13.95□□□□□ -0.18
VARS-228ENST00000495010 PTGIRP43119 386 aa13.95□□□□□ -0.18
VARS-228ENST00000495010 ARSEP51690 589 aa13.95□□□□□ -0.18
VARS-228ENST00000495010 GSDMDP57764 484 aa13.95□□□□□ -0.18
VARS-228ENST00000495010 TUBB4BP68371 445 aa13.95□□□□□ -0.18
VARS-228ENST00000495010 GBE1Q04446 702 aa13.95□□□□□ -0.18
VARS-228ENST00000495010 AP1B1Q10567 949 aa13.95□□□□□ -0.18
VARS-228ENST00000495010 TMEM115Q12893 351 aaPredicted RBP13.95□□□□□ -0.18
VARS-228ENST00000495010 MRPL49Q13405 166 aaKnown RBP13.95□□□□□ -0.18
VARS-228ENST00000495010 TUBB2AQ13885 445 aa13.95□□□□□ -0.18
VARS-228ENST00000495010 NFKBIBQ15653 356 aa13.95□□□□□ -0.18
VARS-228ENST00000495010 PAPD7Q5XG87 772 aaKnown RBP13.95□□□□□ -0.18
VARS-228ENST00000495010 MAMDC2Q7Z304 686 aaPredicted RBP13.95□□□□□ -0.18
VARS-228ENST00000495010 NT5DC3Q86UY8 548 aa13.95□□□□□ -0.18
VARS-228ENST00000495010 AMZ2Q86W34 360 aa13.95□□□□□ -0.18
VARS-228ENST00000495010 OR8K5Q8NH50 307 aa13.95□□□□□ -0.18
VARS-228ENST00000495010 VPS35Q96QK1 796 aa13.95□□□□□ -0.18
VARS-228ENST00000495010 CD180Q99467 661 aa13.95□□□□□ -0.18
VARS-228ENST00000495010 TUBB2BQ9BVA1 445 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms