RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 ANKMY1Q9P2S6 941 aa12.43□□□□□ -0.42
SKA1-205ENST00000494518 ANAPC2Q9UJX6 822 aa12.43□□□□□ -0.42
SKA1-205ENST00000494518 TMPRSS11EQ9UL52 423 aa12.43□□□□□ -0.42
SKA1-205ENST00000494518 HYOU1Q9Y4L1 999 aa12.43□□□□□ -0.42
SKA1-205ENST00000494518 SEC16AO15027 2179 aa12.42□□□□□ -0.42
SKA1-205ENST00000494518 MTSS1O43312 755 aa12.42□□□□□ -0.42
SKA1-205ENST00000494518 CDK14O94921 469 aa12.42□□□□□ -0.42
SKA1-205ENST00000494518 TIAF1O95411 115 aa12.42□□□□□ -0.42
SKA1-205ENST00000494518 CAPZBP47756 277 aa12.42□□□□□ -0.42
SKA1-205ENST00000494518 DCDC1P59894 354 aa12.42□□□□□ -0.42
SKA1-205ENST00000494518 SEPT6Q14141 434 aa12.42□□□□□ -0.42
SKA1-205ENST00000494518 UBAP2LQ14157 1087 aaKnown RBP12.42□□□□□ -0.42
SKA1-205ENST00000494518 KCNAB1Q14722 419 aa12.42□□□□□ -0.42
SKA1-205ENST00000494518 ATP13A5Q4VNC0 1218 aa12.42□□□□□ -0.42
SKA1-205ENST00000494518 SLC9A4Q6AI14 798 aa12.42□□□□□ -0.42
SKA1-205ENST00000494518 TTC30BQ8N4P2 665 aa12.42□□□□□ -0.42
SKA1-205ENST00000494518 AVL9Q8NBF6 648 aa12.42□□□□□ -0.42
SKA1-205ENST00000494518 GPR150Q8NGU9 434 aa12.42□□□□□ -0.42
SKA1-205ENST00000494518 TIMM29Q9BSF4 260 aa12.42□□□□□ -0.42
SKA1-205ENST00000494518 MAK16Q9BXY0 300 aaKnown RBP12.42□□□□□ -0.42
SKA1-205ENST00000494518 SLC25A51Q9H1U9 297 aa12.42□□□□□ -0.42
SKA1-205ENST00000494518 ZNF768Q9H5H4 540 aaKnown RBP12.42□□□□□ -0.42
SKA1-205ENST00000494518 UCK1Q9HA47 277 aa12.42□□□□□ -0.42
SKA1-205ENST00000494518 GLOD4Q9HC38 313 aa12.42□□□□□ -0.42
SKA1-205ENST00000494518 MAGEE1Q9HCI5 957 aa12.42□□□□□ -0.42
SKA1-205ENST00000494518 WDR37Q9Y2I8 494 aa12.42□□□□□ -0.42
SKA1-205ENST00000494518 KCNMB2Q9Y691 235 aa12.42□□□□□ -0.42
SKA1-205ENST00000494518 C3orf70A6NLC5 250 aaPredicted RBP12.41□□□□□ -0.42
SKA1-205ENST00000494518 GOLGA6L19H0YKK7 550 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 PPP1R12AO14974 1030 aaPredicted RBP12.41□□□□□ -0.42
SKA1-205ENST00000494518 BUD23O43709 281 aaKnown RBP12.41□□□□□ -0.42
SKA1-205ENST00000494518 SPAG6O75602 509 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 NDST3O95803 873 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 IDSP22304 550 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 PBLDP30039 288 aaPredicted RBP12.41□□□□□ -0.42
SKA1-205ENST00000494518 CA5AP35218 305 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 MLLT10P55197 1068 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 MAP7Q14244 749 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 PDK1Q15118 436 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 SLC18A3Q16572 532 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 CERS6Q6ZMG9 384 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 C11orf96Q7Z7L8 435 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 SLC25A41Q8N5S1 370 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 SLC35G2Q8TBE7 412 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 CT55Q8WUE5 264 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 NAT14Q8WUY8 206 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 OLFM3Q96PB7 478 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 RUFY1Q96T51 708 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 TWSG1Q9GZX9 223 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 DEF6Q9H4E7 631 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 SLC40A1Q9NP59 571 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 SPTLC3Q9NUV7 552 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 POT1Q9NUX5 634 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 NFKBIL1Q9UBC1 381 aaPredicted RBP12.41□□□□□ -0.42
SKA1-205ENST00000494518 SAE1Q9UBE0 346 aaPredicted RBP12.41□□□□□ -0.42
SKA1-205ENST00000494518 PSMD13Q9UNM6 376 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 KCTD3Q9Y597 815 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 PCDHB3Q9Y5E6 796 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 TEX15Q9BXT5 2789 aa12.41□□□□□ -0.42
SKA1-205ENST00000494518 NOTCH2Q04721 2471 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 CCDC88CQ9P219 2028 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 ESPL1Q14674 2120 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 A0A0A6YYK5 440 aaPredicted RBP12.4□□□□□ -0.42
SKA1-205ENST00000494518 IGHV5-51A0A0C4DH38 117 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 PIPSLA2A3N6 862 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 GPR89AB7ZAQ6 455 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 VEGFDO43915 354 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 UGT1A9O60656 530 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 DNAJB5O75953 348 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 GPR89BP0CG08 455 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 UGT1A6P19224 532 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 UGT1A1P22309 533 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 UGT1A4P22310 534 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 PTPN3P26045 913 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 CHRNA4P43681 627 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 CTSCP53634 463 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 RPS18P62269 152 aaKnown RBP12.4□□□□□ -0.42
SKA1-205ENST00000494518 TMEM115Q12893 351 aaPredicted RBP12.4□□□□□ -0.42
SKA1-205ENST00000494518 DNASE1L3Q13609 305 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 GTF2H3Q13889 308 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 PDPK2PQ6A1A2 396 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 CCDC70Q6NSX1 233 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 ABRAXAS1Q6UWZ7 409 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 FAM151BQ6UXP7 276 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 FAM83HQ6ZRV2 1179 aaPredicted RBP12.4□□□□□ -0.42
SKA1-205ENST00000494518 PRSS42Q7Z5A4 293 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 TADA1Q96BN2 335 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 XPO4Q9C0E2 1151 aaKnown RBP12.4□□□□□ -0.42
SKA1-205ENST00000494518 AKIRIN1Q9H9L7 192 aaPredicted RBP12.4□□□□□ -0.42
SKA1-205ENST00000494518 UGT1A7Q9HAW7 530 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 UGT1A10Q9HAW8 530 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 UGT1A8Q9HAW9 530 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 RAD18Q9NS91 495 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 FAM8A1Q9UBU6 413 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 POLHQ9Y253 713 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 CFAP20Q9Y6A4 193 aaKnown RBP12.4□□□□□ -0.42
SKA1-205ENST00000494518 PIKFYVEQ9Y2I7 2098 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 SHANK1Q9Y566 2161 aa12.4□□□□□ -0.42
SKA1-205ENST00000494518 OR2AG2A6NM03 316 aa12.39□□□□□ -0.43
SKA1-205ENST00000494518 MKRN2OSH3BPM6 223 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms