RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 ZNF547Q8IVP9 402 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 CACTIN-AS1Q8N1I8 211 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 ARL10Q8N8L6 244 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 CCDC89Q8N998 374 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 DDHD1Q8NEL9 900 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 OR52K1Q8NGK4 314 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 IFI44Q8TCB0 444 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 AP1M1Q9BXS5 423 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 GSDMCQ9BYG8 508 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 OR2AG1Q9H205 316 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 RMI1Q9H9A7 625 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 UGT1A7Q9HAW7 530 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 UGT1A10Q9HAW8 530 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 UGT1A8Q9HAW9 530 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 CASS4Q9NQ75 786 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 EIF2B3Q9NR50 452 aaKnown RBP8.66□□□□□ -1.02
ITGB1-217ENST00000494395 PIH1D1Q9NWS0 290 aaKnown RBP8.66□□□□□ -1.02
ITGB1-217ENST00000494395 TAAR2Q9P1P5 351 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 PADI4Q9UM07 663 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 MSRB2Q9Y3D2 182 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 PKP3Q9Y446 797 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 PRKAB1Q9Y478 270 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 KNTC1P50748 2209 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 PIKFYVEQ9Y2I7 2098 aa8.66□□□□□ -1.02
ITGB1-217ENST00000494395 AKAP13Q12802 2813 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 C2orf81A6NN90 581 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 NTN3O00634 580 aaPredicted RBP8.65□□□□□ -1.02
ITGB1-217ENST00000494395 GRID2O43424 1007 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 VEGFDO43915 354 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 OPA1O60313 960 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 SRP72O76094 671 aaKnown RBP8.65□□□□□ -1.02
ITGB1-217ENST00000494395 ASMTLO95671 621 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 CRTAMO95727 393 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 CAPNS1P04632 268 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 PCSK2P16519 638 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 TPH1P17752 444 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 TCP1P17987 556 aaKnown RBP8.65□□□□□ -1.02
ITGB1-217ENST00000494395 COILP38432 576 aaPredicted RBP8.65□□□□□ -1.02
ITGB1-217ENST00000494395 MAGEA6P43360 314 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 CLCNKAP51800 687 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 PDE1BQ01064 536 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 E2F1Q01094 437 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 TAGLNQ01995 201 aaKnown RBP8.65□□□□□ -1.02
ITGB1-217ENST00000494395 CDH17Q12864 832 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 ILF3Q12906 894 aaKnown RBP eCLIP8.65□□□□□ -1.02
ITGB1-217ENST00000494395 NFATC2Q13469 925 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 ITGA9Q13797 1035 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 LRP8Q14114 963 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 KCNJ11Q14654 390 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 POU6F1Q14863 301 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 NR1D2Q14995 579 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 C14orf28Q4W4Y0 310 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 CERCAMQ5T4B2 595 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 GPRC6AQ5T6X5 926 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 HES3Q5TGS1 186 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 XKR5Q6UX68 686 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 ZNF534Q76KX8 674 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 EFL1Q7Z2Z2 1120 aaKnown RBP8.65□□□□□ -1.02
ITGB1-217ENST00000494395 TMPRSS12Q86WS5 348 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 MARCH9Q86YJ5 346 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 GALNT13Q8IUC8 556 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 NAGSQ8N159 534 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 GALNT15Q8N3T1 639 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 FAM46DQ8NEK8 389 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 STYXQ8WUJ0 223 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 PATE1Q8WXA2 126 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 DNAJC1Q96KC8 554 aaKnown RBP8.65□□□□□ -1.02
ITGB1-217ENST00000494395 RANBP9Q96S59 729 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 NAP1L3Q99457 506 aaPredicted RBP8.65□□□□□ -1.02
ITGB1-217ENST00000494395 SUDS3Q9H7L9 328 aaPredicted RBP8.65□□□□□ -1.02
ITGB1-217ENST00000494395 NLE1Q9NVX2 485 aaPredicted RBP8.65□□□□□ -1.02
ITGB1-217ENST00000494395 SIRPGQ9P1W8 387 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 SLC23A2Q9UGH3 650 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 RIMKLBQ9ULI2 386 aa8.65□□□□□ -1.02
ITGB1-217ENST00000494395 FRYQ5TBA9 3013 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 UNC13CQ8NB66 2214 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 IGLV3-16A0A075B6K0 115 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 TCRBV7S3A2A0A539 114 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 B4DGG1 531 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 CCL22O00626 93 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 SGTAO43765 313 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 PHF2O75151 1096 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 CDK14O94921 469 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 PRAMEF1O95521 474 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 EML2O95834 649 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 APRTP07741 180 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 PNLIPP16233 465 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 GLB1P16278 677 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 TPSB2P20231 275 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 ACTN2P35609 894 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 HADHAP40939 763 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 ACTR1BP42025 376 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 FNTAP49354 379 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 ARSDP51689 593 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 MAZP56270 477 aaKnown RBP8.64□□□□□ -1.03
ITGB1-217ENST00000494395 ACTR1AP61163 376 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 GNG11P61952 73 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 CDK16Q00536 496 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 B4GALNT1Q00973 533 aa8.64□□□□□ -1.03
ITGB1-217ENST00000494395 ACVR1Q04771 509 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms