RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 HEPHQ9BQS7 1158 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 CLK4Q9HAZ1 481 aaKnown RBP13.51□□□□□ -0.25
TRIM11-204ENST00000493030 TMEM27Q9HBJ8 222 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 TRPS1Q9UHF7 1281 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 KIF1AQ12756 1690 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 A0A1W2PQ67 120 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 TGDSO95455 350 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 FADS2O95864 444 aaKnown RBP13.51□□□□□ -0.25
TRIM11-204ENST00000493030 TCEA1P23193 301 aaKnown RBP13.51□□□□□ -0.25
TRIM11-204ENST00000493030 PBX1P40424 430 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 RPL5P46777 297 aaKnown RBP13.51□□□□□ -0.25
TRIM11-204ENST00000493030 GTF2H2Q13888 395 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 QPRTQ15274 297 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 QPCTQ16769 361 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 ATXN7L2Q5T6C5 722 aaPredicted RBP13.51□□□□□ -0.25
TRIM11-204ENST00000493030 GTF2H2CQ6P1K8 395 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 MED27Q6P2C8 311 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 KAT2AQ92830 837 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 KLHL32Q96NJ5 620 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 EBPLQ9BY08 206 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 NUDT4Q9NZJ9 180 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 MBD2Q9UBB5 411 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 FKBPLQ9UIM3 349 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 ADGRB2O60241 1585 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 MAGEB3O15480 346 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 PLOD3O60568 738 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 LGR5O75473 907 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 INHAP05111 366 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 C8AP07357 584 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 ACRP10323 421 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 RYKP34925 604 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 DGKGP49619 791 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 CYP4F8P98187 520 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 SIM2Q14190 667 aaPredicted RBP13.51□□□□□ -0.25
TRIM11-204ENST00000493030 SUZ12Q15022 739 aaKnown RBP13.51□□□□□ -0.25
TRIM11-204ENST00000493030 LARS2Q15031 903 aaKnown RBP13.51□□□□□ -0.25
TRIM11-204ENST00000493030 ARL13AQ5H913 290 aaPredicted RBP13.51□□□□□ -0.25
TRIM11-204ENST00000493030 SIDT2Q8NBJ9 832 aaKnown RBP13.51□□□□□ -0.25
TRIM11-204ENST00000493030 NLGN2Q8NFZ4 835 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 OR52J3Q8NH60 311 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 C1GALT1C1Q96EU7 318 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 ELOVL2Q9NXB9 296 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 SLC38A8A6NNN8 435 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 C9IYK1 514 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 PBX3P40426 434 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 GJA9P57773 515 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 SEMG2Q02383 582 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 CHIT1Q13231 466 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 GCNT6Q5T4J0 391 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 UNC5BQ8IZJ1 945 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 SRFBP1Q8NEF9 429 aaKnown RBP13.51□□□□□ -0.25
TRIM11-204ENST00000493030 DBF4BQ8NFT6 615 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 AP3S1Q92572 193 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 CCNB1IP1Q9NPC3 277 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 ITGB1BP2Q9UKP3 347 aa13.51□□□□□ -0.25
TRIM11-204ENST00000493030 SRRM3A6NNA2 597 aaPredicted RBP13.5□□□□□ -0.25
TRIM11-204ENST00000493030 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.5□□□□□ -0.25
TRIM11-204ENST00000493030 TAF4O00268 1085 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 XKRYO14609 159 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 CASKO14936 926 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 PRKCZQ05513 592 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 RBBP4Q09028 425 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 VITQ6UXI7 678 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 MCEMP1Q8IX19 187 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 TRPV3Q8NET8 790 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 CLEC4DQ8WXI8 215 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 B3GALT6Q96L58 329 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 SDCBP2Q9H190 292 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 GRIN2DO15399 1336 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 FAM25EA8MYX2 175 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 SERPINA1P01009 418 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 HTR7P34969 479 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 HSPB3Q12988 150 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 ZNF460Q14592 562 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 UBXN11Q5T124 520 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 DENND5AQ6IQ26 1287 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 TMEM220Q6QAJ8 160 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 CROCCP3Q8IVE0 287 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 PRSS58Q8IYP2 241 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 MSL3Q8N5Y2 521 aaKnown RBP13.5□□□□□ -0.25
TRIM11-204ENST00000493030 KLK6Q92876 244 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 NKD2Q969F2 451 aaPredicted RBP13.5□□□□□ -0.25
TRIM11-204ENST00000493030 PMEPA1Q969W9 287 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 CLPTM1LQ96KA5 538 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 CIB1Q99828 191 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 LPIN3Q9BQK8 851 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 SYT17Q9BSW7 474 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 LRRC72A6NJI9 287 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 RHPN2P1A8MT19 583 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 CLDN4O14493 209 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 MT-ND1P03886 318 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 LIMK2P53671 638 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 ATXN1P54253 815 aaKnown RBP13.5□□□□□ -0.25
TRIM11-204ENST00000493030 SNAPC1Q16533 368 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 ZYG11AQ6WRX3 759 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 CRYBG2Q8N1P7 616 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 TP53INP1Q96A56 240 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 GAL3ST4Q96RP7 486 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 TPK1Q9H3S4 243 aa13.5□□□□□ -0.25
TRIM11-204ENST00000493030 COL6A1P12109 1028 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms