RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 APMAPQ9HDC9 416 aa13.03□□□□□ -0.32
HDAC3-213ENST00000492506 PHPT1Q9NRX4 125 aaPredicted RBP13.03□□□□□ -0.32
HDAC3-213ENST00000492506 KCNK4Q9NYG8 393 aa13.03□□□□□ -0.32
HDAC3-213ENST00000492506 PLEKHB1Q9UF11 243 aaPredicted RBP13.03□□□□□ -0.32
HDAC3-213ENST00000492506 DMGDHQ9UI17 866 aaKnown RBP13.03□□□□□ -0.32
HDAC3-213ENST00000492506 KCNMB2Q9Y691 235 aa13.03□□□□□ -0.32
HDAC3-213ENST00000492506 ESPL1Q14674 2120 aa13.03□□□□□ -0.32
HDAC3-213ENST00000492506 TCRBV5S1A1TA0A578 114 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 FGF10O15520 208 aaPredicted RBP13.02□□□□□ -0.33
HDAC3-213ENST00000492506 HEXIM1O94992 359 aaKnown RBP13.02□□□□□ -0.33
HDAC3-213ENST00000492506 LCA5LO95447 670 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 KRT14P02533 472 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 DESP17661 470 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 ATP6V1C1P21283 382 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 F8A1P23610 371 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 UQCRFS1P47985 274 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 FASLGP48023 281 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 MRPS25P82663 173 aaKnown RBP13.02□□□□□ -0.33
HDAC3-213ENST00000492506 BCL2L1Q07817 233 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 KLC1Q07866 573 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 NSUN2Q08J23 767 aaKnown RBP eCLIP13.02□□□□□ -0.33
HDAC3-213ENST00000492506 ODF2Q5BJF6 829 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 TRPM8Q7Z2W7 1104 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 HSD11B1LQ7Z5J1 315 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 PIGWQ7Z7B1 504 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 ZNF761Q86XN6 746 aaPredicted RBP13.02□□□□□ -0.33
HDAC3-213ENST00000492506 AGAP11Q8TF27 550 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 STARD8Q92502 1023 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 RAPGEF5Q92565 580 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 DTD2Q96FN9 168 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 PCDHB18PQ96TA0 734 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 TUBGCP2Q9BSJ2 902 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 EFHD1Q9BUP0 239 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 FBXO8Q9NRD0 319 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 ATXN10Q9UBB4 475 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 MED13Q9UHV7 2174 aa13.02□□□□□ -0.33
HDAC3-213ENST00000492506 A0A0U1RQJ8 604 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 A8MU76 341 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 PALMO75781 387 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 STK17BO94768 372 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 GFPT2O94808 682 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 EML2O95834 649 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 DLGAP3O95886 979 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 SOD1P00441 154 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 KRT7P08729 469 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 LHCGRP22888 699 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 TEAD1P28347 426 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 HNRNPH3P31942 346 aaKnown RBP13.01□□□□□ -0.33
HDAC3-213ENST00000492506 ETV3P41162 512 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 STAT5AP42229 794 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 RANBP1P43487 201 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 ZNF143P52747 638 aaPredicted RBP13.01□□□□□ -0.33
HDAC3-213ENST00000492506 AIF1P55008 147 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.01□□□□□ -0.33
HDAC3-213ENST00000492506 C1QTNF12Q5T7M4 302 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 SCYL2Q6P3W7 929 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 WDR74Q6RFH5 385 aaPredicted RBP13.01□□□□□ -0.33
HDAC3-213ENST00000492506 CEACAM20Q6UY09 585 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 ARHGAP36Q6ZRI8 547 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 ATCAYQ86WG3 371 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 ARHGAP12Q8IWW6 846 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 MAIP1Q8WWC4 291 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 ZPBPQ9BS86 351 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 BLOC1S6Q9UL45 172 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 MRPS18BQ9Y676 258 aaKnown RBP13.01□□□□□ -0.33
HDAC3-213ENST00000492506 CSMD1Q96PZ7 3565 aa13.01□□□□□ -0.33
HDAC3-213ENST00000492506 TTC24A2A3L6 582 aaPredicted RBP13□□□□□ -0.33
HDAC3-213ENST00000492506 SIGLEC16A6NMB1 481 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 HTRA2O43464 458 aaPredicted RBP13□□□□□ -0.33
HDAC3-213ENST00000492506 FURINP09958 794 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 TCN2P20062 427 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 ACTR1BP42025 376 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 SCNN1BP51168 640 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 ACTR1AP61163 376 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 RPL7AP62424 266 aaKnown RBP13□□□□□ -0.33
HDAC3-213ENST00000492506 MC1RQ01726 317 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 UBXN1Q04323 297 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 PEX6Q13608 980 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 SEPT6Q14141 434 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 PPP2R5EQ16537 467 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 PARP6Q2NL67 630 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 TCTN3Q6NUS6 607 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 C16orf46Q6P387 395 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 PHF13Q86YI8 300 aaPredicted RBP13□□□□□ -0.33
HDAC3-213ENST00000492506 SFRP1Q8N474 314 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 SLC37A2Q8TED4 501 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 RMDN2Q96LZ7 410 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 PSKH2Q96QS6 385 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 CINPQ9BW66 212 aaPredicted RBP13□□□□□ -0.33
HDAC3-213ENST00000492506 GANQ9H2C0 597 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 TRIT1Q9H3H1 467 aaKnown RBP13□□□□□ -0.33
HDAC3-213ENST00000492506 KCTD5Q9NXV2 234 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 ADAM22Q9P0K1 906 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 SCOCQ9UIL1 159 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 KCTD3Q9Y597 815 aa13□□□□□ -0.33
HDAC3-213ENST00000492506 ABCA12Q86UK0 2595 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 TRBV23OR9-2A0A075B6M9 112 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 ARHGAP42A6NI28 874 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 CCDC166P0CW27 439 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 RNF224P0DH78 156 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms