RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 C2orf81A6NN90 581 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 A8MU76 341 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 APOC4-APOC2K7ER74 178 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 PMPCBO75439 489 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 STK17BO94768 372 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 EML2O95834 649 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 APOC2P02655 101 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 SLC4A1P02730 911 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 TNNT1P13805 278 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 MPSTP25325 297 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 CAPZBP47756 277 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 GEMP55040 296 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 WNT3AP56704 352 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 TMEM115Q12893 351 aaPredicted RBP8.61□□□□□ -1.03
NUP50-217ENST00000491860 NFATC3Q12968 1075 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 PRPSAP1Q14558 356 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 LONRF2Q1L5Z9 754 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 COLEC12Q5KU26 742 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 CCDC181Q5TID7 509 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 CRTC3Q6UUV7 619 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 NPNTQ6UXI9 565 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 PID1Q7Z2X4 250 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 PRSS42Q7Z5A4 293 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 AMZ2Q86W34 360 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 ZNF761Q86XN6 746 aaPredicted RBP8.61□□□□□ -1.03
NUP50-217ENST00000491860 KMT5CQ86Y97 462 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 CCDC50Q8IVM0 306 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 CARFQ8N187 725 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 TXLNBQ8N3L3 684 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 EXD3Q8N9H8 876 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 DDHD1Q8NEL9 900 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 SPATA22Q8NHS9 363 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 LRRN4Q8WUT4 740 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 HEXDCQ8WVB3 486 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 ZFPM2Q8WW38 1151 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 UBXN4Q92575 508 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 EID2BQ96D98 161 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 FCRL4Q96PJ5 515 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 QKIQ96PU8 341 aaKnown RBP eCLIP8.61□□□□□ -1.03
NUP50-217ENST00000491860 CD180Q99467 661 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 CEP41Q9BYV8 373 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 SLC25A18Q9H1K4 315 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 ZNF768Q9H5H4 540 aaKnown RBP8.61□□□□□ -1.03
NUP50-217ENST00000491860 SMOXQ9NWM0 555 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 TMEM9Q9P0T7 183 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 FEZ2Q9UHY8 353 aaPredicted RBP8.61□□□□□ -1.03
NUP50-217ENST00000491860 AAR2Q9Y312 384 aaKnown RBP8.61□□□□□ -1.03
NUP50-217ENST00000491860 PCDHB3Q9Y5E6 796 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 ALG6Q9Y672 507 aa8.61□□□□□ -1.03
NUP50-217ENST00000491860 hCG_1818297A0A087WSY0 165 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 PRR19A6NJB7 356 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 AGRPO00253 132 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 STX7O15400 261 aaKnown RBP8.6□□□□□ -1.03
NUP50-217ENST00000491860 SUV39H1O43463 412 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 RASSF9O75901 435 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 DLGAP3O95886 979 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 RECKO95980 971 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 CCNYL3P0C7X3 344 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 PIRTP0C851 137 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 RALBP11234 206 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 LIFP15018 202 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 NFKB1P19838 968 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 MSH3P20585 1137 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 SLC19A1P41440 591 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 WASHC5Q12768 1159 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 TBX2Q13207 712 aaPredicted RBP8.6□□□□□ -1.03
NUP50-217ENST00000491860 SEPT6Q14141 434 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 SLC1A5Q15758 541 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.6□□□□□ -1.03
NUP50-217ENST00000491860 ATP13A5Q4VNC0 1218 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 SIRPB2Q5JXA9 342 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 KAZNQ674X7 775 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 KDELC1Q6UW63 502 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 BBS12Q6ZW61 710 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 DAAM2Q86T65 1068 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 CDKL3Q8IVW4 592 aaPredicted RBP8.6□□□□□ -1.03
NUP50-217ENST00000491860 ZNF567Q8N184 647 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 ULK4Q96C45 1275 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 MRGPRX2Q96LB1 330 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 TBC1D10AQ9BXI6 508 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 SPRY4Q9C004 299 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 TRIM5Q9C035 493 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 PDE7BQ9NP56 450 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 SLC40A1Q9NP59 571 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 IL26Q9NPH9 171 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 IL17CQ9P0M4 197 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 RSPH14Q9UHP6 348 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 KCND3Q9UK17 655 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 ACSL5Q9ULC5 683 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 DNAJC16Q9Y2G8 782 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 KCTD3Q9Y597 815 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 PCDHA13Q9Y5I0 950 aa8.6□□□□□ -1.03
NUP50-217ENST00000491860 PCYT1BQ9Y5K3 369 aaPredicted RBP8.6□□□□□ -1.03
NUP50-217ENST00000491860 ZNF106Q9H2Y7 1883 aaKnown RBP8.6□□□□□ -1.03
NUP50-217ENST00000491860 FLNCQ14315 2725 aa8.59□□□□□ -1.03
NUP50-217ENST00000491860 CCDC66A2RUB6 948 aa8.59□□□□□ -1.03
NUP50-217ENST00000491860 GOLGA6L3A6NEY3 463 aa8.59□□□□□ -1.03
NUP50-217ENST00000491860 C5orf60A6NFR6 353 aa8.59□□□□□ -1.03
NUP50-217ENST00000491860 CFAP99D6REC4 459 aa8.59□□□□□ -1.03
NUP50-217ENST00000491860 H7C0C1 242 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms