RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 SLC30A2Q9BRI3 323 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 FTHL17Q9BXU8 183 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 GPBP1L1Q9HC44 474 aaPredicted RBP11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 WDR6Q9NNW5 1121 aaKnown RBP11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 PDGFCQ9NRA1 345 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 CLN6Q9NWW5 311 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 HMGXB4Q9UGU5 601 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 OGDHLQ9ULD0 1010 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 GRIP1Q9Y3R0 1128 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 A0A1W2PRG6 482 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 FAM234BA2RU67 622 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 HPRP00739 348 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 PSMA1P25786 263 aaKnown RBP11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 IDUAP35475 653 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 CD47Q08722 323 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 SLC10A2Q12908 348 aaPredicted RBP11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 BICRALQ6AI39 1079 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 ZNF621Q6ZSS3 439 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 AMIGO1Q86WK6 493 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 TRIM48Q8IWZ4 208 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 ADGRG5Q8IZF4 528 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 SPATA22Q8NHS9 363 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 SLC35B4Q969S0 331 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 CEP295NLQ96MC4 621 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 TRNT1Q96Q11 434 aaKnown RBP11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 MRPL45Q9BRJ2 306 aaKnown RBP11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 ELOVL6Q9H5J4 265 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 NANOGQ9H9S0 305 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 MEAF6Q9HAF1 191 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 GSTK1Q9Y2Q3 226 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 HES2Q9Y543 173 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 C5orf58C9J3I9 102 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 TMX2-CTNND1H3BSU7 103 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 B4GALT5O43286 388 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 IL7P13232 177 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 MAGEA6P43360 314 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 SRP54P61011 504 aaKnown RBP11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 Q3C1V9 767 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 ATP6V0D2Q8N8Y2 350 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 TRIT1Q9H3H1 467 aaKnown RBP11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 GLOD4Q9HC38 313 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 ZNF624Q9P2J8 865 aaPredicted RBP11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 LYVE1Q9Y5Y7 322 aa11.19□□□□□ -0.62
CRNKL1-204ENST00000490910 C2orf81A6NN90 581 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 ACOX3O15254 700 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 PIGRP01833 764 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 MMP10P09238 476 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 HIST1H2AGP0C0S8 130 aaPredicted RBP11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 HIST1H2ADP20671 130 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 OXTRP30559 389 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 PGGT1BP53609 377 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 HERVK_113P63132 956 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 MADCAM1Q13477 382 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 CLCA4Q14CN2 919 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 FBXO48Q5FWF7 155 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 ABHD15Q6UXT9 468 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 RRM2BQ7LG56 351 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 NKAPQ8N5F7 415 aaKnown RBP11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 MYLPFQ96A32 169 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 HIST1H2AHQ96KK5 128 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 HIST1H2AJQ99878 128 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 H2AFJQ9BTM1 129 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 ZSCAN5AQ9BUG6 496 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 ERVK-6Q9BXR3 956 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 ULBP1Q9BZM6 244 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 SLA2Q9H6Q3 261 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 C14orf119Q9NWQ9 140 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 ERAP1Q9NZ08 941 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 KLQ9UEF7 1012 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 MAFO75444 373 aaPredicted RBP11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 GUCA1CO95843 209 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 MT-ND2P03891 347 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 FAM163BP0C2L3 166 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 SLC35E2BP0CK96 405 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 HOXD11P31277 338 aaPredicted RBP11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 ARL2P36404 184 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 HUNKP57058 714 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 AP5B1Q2VPB7 878 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 DCAF4L1Q3SXM0 396 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 LCN1P1Q5VSP4 162 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 AGAP6Q5VW22 663 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 TXNDC11Q6PKC3 985 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 CASP12Q6UXS9 341 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 RHOXF1Q8NHV9 184 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 WDR36Q8NI36 951 aaKnown RBP11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 TRAPPC12Q8WVT3 735 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 AP3S1Q92572 193 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 SLC38A4Q969I6 547 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 AGAP4Q96P64 663 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 BEX2Q9BXY8 128 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 ABCB9Q9NP78 766 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 PIN4Q9Y237 131 aaKnown RBP11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 IFRD1O00458 451 aaPredicted RBP11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 TSPAN3O60637 253 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 PSIP1O75475 530 aaKnown RBP11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 SIX3O95343 332 aaPredicted RBP11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 IL6P05231 212 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 CCNYL3P0C7X3 344 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 BMP4P12644 408 aa11.18□□□□□ -0.62
CRNKL1-204ENST00000490910 ENDOUP21128 410 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms