RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 IL27RAQ6UWB1 636 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 RAPH1Q70E73 1250 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 RD3Q7Z3Z2 195 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 CCDC91Q7Z6B0 441 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 LPGAT1Q92604 370 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 ATOH1Q92858 354 aaPredicted RBP10.81□□□□□ -0.68
VARS2-210ENST00000490699 BMFQ96LC9 184 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 OR2M4Q96R27 311 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 NUSAP1Q9BXS6 441 aaKnown RBP10.81□□□□□ -0.68
VARS2-210ENST00000490699 CENPHQ9H3R5 247 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 VIPAS39Q9H9C1 493 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 CARS2Q9HA77 564 aaKnown RBP10.81□□□□□ -0.68
VARS2-210ENST00000490699 PLAC1Q9HBJ0 212 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 TRMT6Q9UJA5 497 aaKnown RBP10.81□□□□□ -0.68
VARS2-210ENST00000490699 SMG5Q9UPR3 1016 aaKnown RBP10.81□□□□□ -0.68
VARS2-210ENST00000490699 SLC17A4Q9Y2C5 497 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 CA5BQ9Y2D0 317 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 GPSM3Q9Y4H4 160 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 DNMT3AQ9Y6K1 912 aaPredicted RBP10.81□□□□□ -0.68
VARS2-210ENST00000490699 R4GN57 208 aa10.81□□□□□ -0.68
VARS2-210ENST00000490699 ATXN2Q99700 1313 aaKnown RBP10.81□□□□□ -0.68
VARS2-210ENST00000490699 SPTY2D1-AS1A0A0U1RR47 76 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 PABPN1LA6NDY0 278 aaKnown RBP10.8□□□□□ -0.68
VARS2-210ENST00000490699 OR2AG2A6NM03 316 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 CXorf49A8MYA2 514 aaPredicted RBP10.8□□□□□ -0.68
VARS2-210ENST00000490699 C10orf142B7Z368 130 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 RGS16O15492 202 aaPredicted RBP10.8□□□□□ -0.68
VARS2-210ENST00000490699 GRID2O43424 1007 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 NUAK1O60285 661 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 OPA1O60313 960 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 DFNA5O60443 496 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 DNAJC6O75061 913 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 MTX2O75431 263 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 TCEA3O75764 348 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 HAUS5O94927 633 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 TRIM16O95361 564 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 ITGA2BP08514 1039 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 STMN1P16949 149 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 SLCO1A2P46721 670 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 GNPDA1P46926 289 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 ARRB1P49407 418 aaPredicted RBP10.8□□□□□ -0.68
VARS2-210ENST00000490699 PRLHRP49683 370 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 RGS4P49798 205 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 ATXN3P54252 364 aaPredicted RBP10.8□□□□□ -0.68
VARS2-210ENST00000490699 SRP54P61011 504 aaKnown RBP10.8□□□□□ -0.68
VARS2-210ENST00000490699 POU4F1Q01851 419 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 PLOD1Q02809 727 aaPredicted RBP10.8□□□□□ -0.68
VARS2-210ENST00000490699 ILF3Q12906 894 aaKnown RBP eCLIP10.8□□□□□ -0.68
VARS2-210ENST00000490699 DNAJC3Q13217 504 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 LRP8Q14114 963 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 SEMA3AQ14563 771 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 USP10Q14694 798 aaKnown RBP10.8□□□□□ -0.68
VARS2-210ENST00000490699 RASA2Q15283 850 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 BCL7AQ4VC05 210 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 LRRC8EQ6NSJ5 796 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 CNSTQ6PJW8 725 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 CRTC3Q6UUV7 619 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 OTOAQ7RTW8 1153 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 ADGRG6Q86SQ4 1221 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 AMZ2Q86W34 360 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 ZC3HC1Q86WB0 502 aaKnown RBP10.8□□□□□ -0.68
VARS2-210ENST00000490699 TDRPQ86YL5 185 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 HID1Q8IV36 788 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 ELMO1Q92556 727 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 KCNJ9Q92806 393 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 TMEM159Q96B96 161 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 SGF29Q96ES7 293 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 CABS1Q96KC9 395 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 CCM2Q9BSQ5 444 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 AARSD1Q9BTE6 412 aaKnown RBP10.8□□□□□ -0.68
VARS2-210ENST00000490699 BOCQ9BWV1 1114 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 LGR4Q9BXB1 951 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 ZDHHC5Q9C0B5 715 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 EBF2Q9HAK2 575 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 CYP4F12Q9HCS2 524 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 SARS2Q9NP81 518 aaKnown RBP10.8□□□□□ -0.68
VARS2-210ENST00000490699 SPATS2LQ9NUQ6 558 aaKnown RBP10.8□□□□□ -0.68
VARS2-210ENST00000490699 DNAJC28Q9NX36 388 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 SLC17A6Q9P2U8 582 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 ATXN10Q9UBB4 475 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 TBK1Q9UHD2 729 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 TLK1Q9UKI8 766 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 PILRBQ9UKJ0 227 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 SLC39A10Q9ULF5 831 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 CNOT6Q9ULM6 557 aaKnown RBP10.8□□□□□ -0.68
VARS2-210ENST00000490699 DOLKQ9UPQ8 538 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 TMEM98Q9Y2Y6 226 aa10.8□□□□□ -0.68
VARS2-210ENST00000490699 YKT6O15498 198 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 OR1I1O60431 355 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 PIAS1O75925 651 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 EPN2O95208 641 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 SHBGP04278 402 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 ZNF8P17098 575 aaPredicted RBP10.79□□□□□ -0.68
VARS2-210ENST00000490699 CRABP2P29373 138 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 TYK2P29597 1187 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 PBLDP30039 288 aaPredicted RBP10.79□□□□□ -0.68
VARS2-210ENST00000490699 MAPK9P45984 424 aa10.79□□□□□ -0.68
VARS2-210ENST00000490699 CSNK1EP49674 416 aaKnown RBP10.79□□□□□ -0.68
VARS2-210ENST00000490699 KPNA2P52292 529 aaKnown RBP10.79□□□□□ -0.68
VARS2-210ENST00000490699 NXPH1P58417 271 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms