RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 YIPF1Q9Y548 306 aa3.45□□□□□ -1.86
HMGN1-218ENST00000490032 RNF215Q9Y6U7 377 aa3.45□□□□□ -1.86
HMGN1-218ENST00000490032 A0A1B0GVC2 190 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 A0A1W2PPH5 198 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 A6NL46 340 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 DUXAA6NLW8 204 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 TCERG1O14776 1098 aaKnown RBP3.44□□□□□ -1.86
HMGN1-218ENST00000490032 NDUFS3O75489 264 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 ZNF821O75541 412 aaPredicted RBP3.44□□□□□ -1.86
HMGN1-218ENST00000490032 LIPFP07098 398 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 LIFP15018 202 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 HRH2P25021 359 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 PBX3P40426 434 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 RGS2P41220 211 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 MMP15P51511 669 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 NIPAL4Q0D2K0 466 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 LPAL2Q16609 132 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 CYP20A1Q6UW02 462 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 HACE1Q8IYU2 909 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 C1orf52Q8N6N3 182 aaKnown RBP3.44□□□□□ -1.86
HMGN1-218ENST00000490032 SMPDL3BQ92485 455 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 ANKRD9Q96BM1 317 aaPredicted RBP3.44□□□□□ -1.86
HMGN1-218ENST00000490032 ART5Q96L15 291 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 PRMT6Q96LA8 375 aaPredicted RBP3.44□□□□□ -1.86
HMGN1-218ENST00000490032 GFI1Q99684 422 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 OPRPNQ99935 248 aaPredicted RBP3.44□□□□□ -1.86
HMGN1-218ENST00000490032 RAD21L1Q9H4I0 556 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 POLR1BQ9H9Y6 1135 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 FGF22Q9HCT0 170 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 ZDHHC18Q9NUE0 388 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 SLC38A7Q9NVC3 462 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 TRMT1Q9NXH9 659 aaKnown RBP3.44□□□□□ -1.86
HMGN1-218ENST00000490032 RCC2Q9P258 522 aaKnown RBP3.44□□□□□ -1.86
HMGN1-218ENST00000490032 PGAP2Q9UHJ9 254 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 FLT1P17948 1338 aa3.44□□□□□ -1.86
HMGN1-218ENST00000490032 TEX13DA0A0J9YY54 714 aaPredicted RBP3.43□□□□□ -1.86
HMGN1-218ENST00000490032 SMAD9O15198 467 aaKnown RBP3.43□□□□□ -1.86
HMGN1-218ENST00000490032 CLIC2O15247 247 aa3.43□□□□□ -1.86
HMGN1-218ENST00000490032 SYNCRIPO60506 623 aaKnown RBP3.43□□□□□ -1.86
HMGN1-218ENST00000490032 SPARCP09486 303 aa3.43□□□□□ -1.86
HMGN1-218ENST00000490032 PLA2G4BP0C869 781 aa3.43□□□□□ -1.86
HMGN1-218ENST00000490032 GNAZP19086 355 aa3.43□□□□□ -1.86
HMGN1-218ENST00000490032 ACADLP28330 430 aa3.43□□□□□ -1.86
HMGN1-218ENST00000490032 CASP6P55212 293 aa3.43□□□□□ -1.86
HMGN1-218ENST00000490032 TFAP4Q01664 338 aa3.43□□□□□ -1.86
HMGN1-218ENST00000490032 MVPQ14764 893 aaKnown RBP3.43□□□□□ -1.86
HMGN1-218ENST00000490032 ZFP69Q49AA0 526 aa3.43□□□□□ -1.86
HMGN1-218ENST00000490032 ARHGAP12Q8IWW6 846 aa3.43□□□□□ -1.86
HMGN1-218ENST00000490032 DIS3L2Q8IYB7 885 aaKnown RBP3.43□□□□□ -1.86
HMGN1-218ENST00000490032 DDHD1Q8NEL9 900 aa3.43□□□□□ -1.86
HMGN1-218ENST00000490032 ETNPPLQ8TBG4 499 aa3.43□□□□□ -1.86
HMGN1-218ENST00000490032 TBATAQ96M53 351 aa3.43□□□□□ -1.86
HMGN1-218ENST00000490032 PSD2Q9BQI7 771 aa3.43□□□□□ -1.86
HMGN1-218ENST00000490032 SIX2Q9NPC8 291 aa3.43□□□□□ -1.86
HMGN1-218ENST00000490032 OR2M5A3KFT3 312 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 ARHGEF9O43307 516 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 PLPP2O43688 288 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 ZNF217O75362 1048 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 BMP10O95393 424 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 NADKO95544 446 aaPredicted RBP3.42□□□□□ -1.86
HMGN1-218ENST00000490032 CLPTM1O96005 669 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 CLEC3BP05452 202 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 KRT19P08727 400 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 CEACAM1P13688 526 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 ITGA3P26006 1051 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 MAP2K2P36507 400 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 CLK1P49759 484 aaKnown RBP3.42□□□□□ -1.86
HMGN1-218ENST00000490032 TUBB2AQ13885 445 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 TMEM187Q14656 261 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 NAB2Q15742 525 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 SLC1A5Q15758 541 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 NDUFAF5Q5TEU4 345 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 ZNF790Q6PG37 636 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 GLDNQ6ZMI3 551 aaPredicted RBP3.42□□□□□ -1.86
HMGN1-218ENST00000490032 TPRG1Q6ZUI0 275 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 CCDC190Q86UF4 302 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 PTOV1Q86YD1 416 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 OR2T12Q8NG77 320 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 OR8K5Q8NH50 307 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 ZNF653Q96CK0 615 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 LINC00479Q96M42 142 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 WDFY2Q96P53 400 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 TUBB2BQ9BVA1 445 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 PDCL3Q9H2J4 239 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 TMEM181Q9P2C4 612 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 DNAJB4Q9UDY4 337 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 LIMA1Q9UHB6 759 aaKnown RBP3.42□□□□□ -1.86
HMGN1-218ENST00000490032 KCNJ14Q9UNX9 436 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 TMEM98Q9Y2Y6 226 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 KCNE2Q9Y6J6 123 aa3.42□□□□□ -1.86
HMGN1-218ENST00000490032 MAGEB17A8MXT2 336 aa3.41□□□□□ -1.86
HMGN1-218ENST00000490032 SCAMP1O15126 338 aa3.41□□□□□ -1.86
HMGN1-218ENST00000490032 CRLF1O75462 422 aa3.41□□□□□ -1.86
HMGN1-218ENST00000490032 EPHA2P29317 976 aa3.41□□□□□ -1.86
HMGN1-218ENST00000490032 GOLGA8DPQ0D2H9 430 aa3.41□□□□□ -1.86
HMGN1-218ENST00000490032 LRMPQ12912 555 aa3.41□□□□□ -1.86
HMGN1-218ENST00000490032 MFAP5Q13361 173 aa3.41□□□□□ -1.86
HMGN1-218ENST00000490032 FAM109BQ6ICB4 259 aaPredicted RBP3.41□□□□□ -1.86
HMGN1-218ENST00000490032 ZNF534Q76KX8 674 aa3.41□□□□□ -1.86
HMGN1-218ENST00000490032 GTSCR1Q86UQ5 136 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms