RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 ZNF232Q9UNY5 417 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 LRCH1Q9Y2L9 728 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 TRAF6Q9Y4K3 522 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.39□□□□□ -1.07
VTI1A-207ENST00000489357 TECTAO75443 2155 aa8.39□□□□□ -1.07
VTI1A-207ENST00000489357 TRAV19A0A0A6YYK7 116 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 C2orf78A6NCI8 922 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 EIF3FO00303 357 aaPredicted RBP8.38□□□□□ -1.07
VTI1A-207ENST00000489357 CCL16O15467 120 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 HTRA2O43464 458 aaPredicted RBP8.38□□□□□ -1.07
VTI1A-207ENST00000489357 PEX1O43933 1283 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 TBL1XO60907 577 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 XYLBO75191 536 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 SRP72O76094 671 aaKnown RBP8.38□□□□□ -1.07
VTI1A-207ENST00000489357 RHOBTB1O94844 696 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 PGLSO95336 258 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 CD160O95971 181 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 LRG1P02750 347 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 CYBBP04839 570 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 NFKBIAP25963 317 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 EPHA3P29320 983 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 CCR2P41597 374 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 CPA2P48052 419 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 CLCN2P51788 898 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 IL2P60568 153 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 STX1BP61266 288 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 LCP2Q13094 533 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 CUL3Q13618 768 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 DMC1Q14565 340 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 TAF11Q15544 211 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 GSTA3Q16772 222 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 MUM1Q2TAK8 710 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 GPR33Q49SQ1 333 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 IRAK1BP1Q5VVH5 260 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 OGFOD2Q6N063 350 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 BNC2Q6ZN30 1099 aaPredicted RBP8.38□□□□□ -1.07
VTI1A-207ENST00000489357 RNF165Q6ZSG1 346 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 DEFB107AQ8IZN7 70 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 GJD3Q8N144 294 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 TTC30BQ8N4P2 665 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 LPCAT1Q8NF37 534 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 MDGA1Q8NFP4 955 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 OR13C4Q8NGS5 318 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 ANKRD49Q8WVL7 239 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 ROPN1LQ96C74 230 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 SLC25A23Q9BV35 468 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 MRPL1Q9BYD6 325 aaKnown RBP8.38□□□□□ -1.07
VTI1A-207ENST00000489357 CEP44Q9C0F1 390 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 ALG9Q9H6U8 611 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 GKN1Q9NS71 199 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 ABCB8Q9NUT2 735 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 POLR3BQ9NW08 1133 aaPredicted RBP8.38□□□□□ -1.07
VTI1A-207ENST00000489357 HCFC1R1Q9NWW0 138 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 GTSE1Q9NYZ3 720 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 IL17CQ9P0M4 197 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 C6orf203Q9P0P8 240 aaPredicted RBP8.38□□□□□ -1.07
VTI1A-207ENST00000489357 EPS15L1Q9UBC2 864 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 VPS51Q9UID3 782 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 SARDHQ9UL12 918 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 POMPQ9Y244 141 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 CRYL1Q9Y2S2 319 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 SH3BP1Q9Y3L3 701 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 SPO11Q9Y5K1 396 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 TNPO3Q9Y5L0 923 aaKnown RBP8.38□□□□□ -1.07
VTI1A-207ENST00000489357 TRIOO75962 3097 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 F5P12259 2224 aa8.38□□□□□ -1.07
VTI1A-207ENST00000489357 KIF26AQ9ULI4 1882 aaPredicted RBP8.38□□□□□ -1.07
VTI1A-207ENST00000489357 DYTNA2CJ06 578 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 ANHXE9PGG2 379 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 PRMT5O14744 637 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-207ENST00000489357 CASQ2O14958 399 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-207ENST00000489357 UBDO15205 165 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 GPC4O75487 556 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 KRT36O76013 467 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 SUPT7LO94864 414 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 IGSF6O95976 241 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 CHEK2O96017 543 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 RHOP08100 348 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 MTHFD2P13995 350 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 ANPEPP15144 967 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 TCF3P15923 654 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 ZNF7P17097 686 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-207ENST00000489357 SERPINA4P29622 427 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 GMPRP36959 345 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 RGRP47804 291 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 NUDT2P50583 147 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 EPHB1P54762 984 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 PKNOX1P55347 436 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 NTHL1P78549 312 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 MRPS35P82673 323 aaKnown RBP8.37□□□□□ -1.07
VTI1A-207ENST00000489357 SLC25A3Q00325 362 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 TIAL1Q01085 375 aaKnown RBP eCLIP8.37□□□□□ -1.07
VTI1A-207ENST00000489357 BCL2L1Q07817 233 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 TRAF2Q12933 501 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 ART3Q13508 389 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 PTK2BQ14289 1009 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 PDCD2Q16342 344 aaPredicted RBP8.37□□□□□ -1.07
VTI1A-207ENST00000489357 OCLNQ16625 522 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 SLC5A9Q2M3M2 681 aa8.37□□□□□ -1.07
VTI1A-207ENST00000489357 UNC50Q53HI1 259 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms