RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 ZNF398Q8TD17 642 aa8.99□□□□□ -0.97
HDAC6-232ENST00000489053 DTX3LQ8TDB6 740 aa8.99□□□□□ -0.97
HDAC6-232ENST00000489053 HEXDCQ8WVB3 486 aa8.99□□□□□ -0.97
HDAC6-232ENST00000489053 MAIP1Q8WWC4 291 aa8.99□□□□□ -0.97
HDAC6-232ENST00000489053 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.99□□□□□ -0.97
HDAC6-232ENST00000489053 EID2BQ96D98 161 aa8.99□□□□□ -0.97
HDAC6-232ENST00000489053 HES6Q96HZ4 224 aa8.99□□□□□ -0.97
HDAC6-232ENST00000489053 TTC1Q99614 292 aa8.99□□□□□ -0.97
HDAC6-232ENST00000489053 TMEM121Q9BTD3 319 aa8.99□□□□□ -0.97
HDAC6-232ENST00000489053 ASPSCR1Q9BZE9 553 aa8.99□□□□□ -0.97
HDAC6-232ENST00000489053 VPS37BQ9H9H4 285 aa8.99□□□□□ -0.97
HDAC6-232ENST00000489053 UGT1A7Q9HAW7 530 aa8.99□□□□□ -0.97
HDAC6-232ENST00000489053 UGT1A10Q9HAW8 530 aa8.99□□□□□ -0.97
HDAC6-232ENST00000489053 UGT1A8Q9HAW9 530 aa8.99□□□□□ -0.97
HDAC6-232ENST00000489053 IL17CQ9P0M4 197 aa8.99□□□□□ -0.97
HDAC6-232ENST00000489053 FAM8A1Q9UBU6 413 aa8.99□□□□□ -0.97
HDAC6-232ENST00000489053 FKBPLQ9UIM3 349 aa8.99□□□□□ -0.97
HDAC6-232ENST00000489053 PCDHGA7Q9Y5G6 932 aa8.99□□□□□ -0.97
HDAC6-232ENST00000489053 CAPN6Q9Y6Q1 641 aa8.99□□□□□ -0.97
HDAC6-232ENST00000489053 KALRNO60229 2985 aa8.99□□□□□ -0.97
HDAC6-232ENST00000489053 PRAMEF33A0A0G2JMD5 474 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 KLHL33A6NCF5 533 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 F8W8V4 182 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 CHUKO15111 745 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 CASC3O15234 703 aaKnown RBP8.98□□□□□ -0.97
HDAC6-232ENST00000489053 NVLO15381 856 aaKnown RBP8.98□□□□□ -0.97
HDAC6-232ENST00000489053 DDX3YO15523 660 aaKnown RBP8.98□□□□□ -0.97
HDAC6-232ENST00000489053 PRAMEF10O60809 474 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 POP7O75817 140 aaKnown RBP8.98□□□□□ -0.97
HDAC6-232ENST00000489053 SRP72O76094 671 aaKnown RBP8.98□□□□□ -0.97
HDAC6-232ENST00000489053 UBXN7O94888 489 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 SLC35G4P0C7Q5 338 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 ITIH1P19827 911 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 CD82P27701 267 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 CLCNKAP51800 687 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 LIMK2P53671 638 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 DRG2P55039 364 aaKnown RBP8.98□□□□□ -0.97
HDAC6-232ENST00000489053 RAB15P59190 212 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 ZFP36L1Q07352 338 aaKnown RBP8.98□□□□□ -0.97
HDAC6-232ENST00000489053 SNX1Q13596 522 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 POU6F1Q14863 301 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 SKIDA1Q1XH10 827 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 MANEAQ5SRI9 462 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 DCAF12Q5T6F0 453 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 ARHGAP40Q5TG30 622 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 ARMC6Q6NXE6 501 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 TMEM71Q6P5X7 295 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 WDR74Q6RFH5 385 aaPredicted RBP8.98□□□□□ -0.97
HDAC6-232ENST00000489053 CLEC14AQ86T13 490 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 SLITRK4Q8IW52 837 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 ATG4AQ8WYN0 398 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 USP7Q93009 1102 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 TAAR9Q96RI9 348 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 UBL7Q96S82 380 aaPredicted RBP8.98□□□□□ -0.97
HDAC6-232ENST00000489053 COPS8Q99627 209 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 POT1Q9NUX5 634 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 IMP3Q9NV31 184 aaKnown RBP8.98□□□□□ -0.97
HDAC6-232ENST00000489053 SLC39A1Q9NY26 324 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 ST14Q9Y5Y6 855 aa8.98□□□□□ -0.97
HDAC6-232ENST00000489053 PLXNB3Q9ULL4 1909 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 ASXL3Q9C0F0 2248 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 LRRK1Q38SD2 2015 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 TEX51A0A1B0GUA7 166 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 PMS2P1A4D2B8 440 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 GOLGA6L3A6NEY3 463 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 LILRA5A6NI73 299 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 EFCAB7A8K855 629 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 ERI2A8K979 691 aaKnown RBP8.97□□□□□ -0.97
HDAC6-232ENST00000489053 CDRT15L2A8MXV6 281 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 STMND1H3BQB6 276 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 AP2A1O95782 977 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 EML2O95834 649 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 THRAP10827 490 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 LIPCP11150 499 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 TYRP1P17643 537 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 XRCC1P18887 633 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-232ENST00000489053 MSNP26038 577 aaKnown RBP8.97□□□□□ -0.97
HDAC6-232ENST00000489053 MC4RP32245 332 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 ADRA1AP35348 466 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 FDFT1P37268 417 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 VAC14Q08AM6 782 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 CDH17Q12864 832 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 OLIG2Q13516 323 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 C16orf72Q14CZ0 275 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 GPR33Q49SQ1 333 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-232ENST00000489053 AGAP9Q5VTM2 703 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 IRGCQ6NXR0 463 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 CYB5D1Q6P9G0 228 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 RANBP10Q6VN20 620 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 TMEM26Q6ZUK4 368 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 SNX20Q7Z614 316 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 SLC13A5Q86YT5 568 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-232ENST00000489053 LRRC8AQ8IWT6 810 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 IL22RA1Q8N6P7 574 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 RASGEF1AQ8N9B8 481 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 OR13C4Q8NGS5 318 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 C1orf54Q8WWF1 131 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 ART4Q93070 314 aa8.97□□□□□ -0.97
HDAC6-232ENST00000489053 KIAA1143Q96AT1 154 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms