RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 CAMKK1Q8N5S9 505 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 OR2I1PQ8NGU4 316 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 RPLP0P6Q8NHW5 317 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 TEKT4Q8WW24 435 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 HSPH1Q92598 858 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 SNRNP25Q9BV90 132 aaKnown RBP8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 TSGA10Q9BZW7 698 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 RAB6CQ9H0N0 254 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 ZWILCHQ9H900 591 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 ANLNQ9NQW6 1124 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 MOCS1Q9NZB8 636 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 MPP6Q9NZW5 540 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 SLC8A2Q9UPR5 921 aa8.15□□□□□ -1.1
TRAPPC12-221ENST00000489032 TRIM24O15164 1050 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 PJA2O43164 708 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 KRT86O43790 486 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 CNTN5O94779 1100 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 RHOBTB1O94844 696 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 NTSR1P30989 418 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 CD70P32970 193 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 GJC1P36383 396 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 CSKP41240 450 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 PXNP49023 591 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 HADHBP55084 474 aaKnown RBP8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 ADAM8P78325 824 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 HHEXQ03014 270 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 STARD3Q14849 445 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 GEN1Q17RS7 908 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 SMTNL2Q2TAL5 461 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 PLK5Q496M5 336 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 ALFQ53S48 1182 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 CCDC181Q5TID7 509 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 TFAP2DQ7Z6R9 452 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 ZNF354CQ86Y25 554 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 GPR135Q8IZ08 494 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 KCTD6Q8NC69 237 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 ACRBPQ8NEB7 543 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 MVB12AQ96EY5 273 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 MYEOVQ96EZ4 313 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 DESI2Q9BSY9 194 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 MEGF9Q9H1U4 602 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 LDAHQ9H6V9 325 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 GPATCH2LQ9NWQ4 482 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 C2orf42Q9NWW7 574 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 PPP4R1LQ9P1A2 415 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 SLC25A13Q9UJS0 675 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 VPS28Q9UK41 221 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 CLEC4EQ9ULY5 219 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 HPCAL4Q9UM19 191 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 TBC1D30Q9Y2I9 924 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 LAMA5O15230 3695 aa8.14□□□□□ -1.11
TRAPPC12-221ENST00000489032 ILVBLA1L0T0 632 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 BCLAF3A2AJT9 711 aaKnown RBP8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 PCNX2A6NKB5 2137 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 USP27XA6NNY8 438 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 BTNL10A8MVZ5 291 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 PRRT4C9JH25 899 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 FAM72CH0Y354 149 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 I6L893 689 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 CDX4O14627 284 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 BUB1O43683 1085 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 SGTAO43765 313 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 SYNCRIPO60506 623 aaKnown RBP8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 RAMP2O60895 175 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 KLF8O95600 359 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 SRPRAP08240 638 aaKnown RBP8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 DLDP09622 509 aaKnown RBP8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 PLA2G2AP14555 144 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 HOXB2P14652 356 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 LPOP22079 712 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 IL1R2P27930 398 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 HOXC13P31276 330 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 HCAR3P49019 387 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 DGKEP52429 567 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 CDH6P55285 790 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 SIM1P81133 766 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 SLC25A11Q02978 314 aaKnown RBP8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 POLD3Q15054 466 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 PDK2Q15119 407 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 DPYSL2Q16555 572 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 FSCBQ5H9T9 825 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 KCNT1Q5JUK3 1230 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 PRAMEF14Q5SWL7 426 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 FAM72AQ5TYM5 149 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 MANEALQ5VSG8 457 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 FAM72DQ6L9T8 149 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 SERPINA13PQ6UXR4 307 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 SYT13Q7L8C5 426 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 POLNQ7Z5Q5 900 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 DAAM2Q86T65 1068 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 ADIPOR2Q86V24 386 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 FAM72BQ86X60 149 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 ZNF683Q8IZ20 524 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 SYCE1Q8N0S2 351 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 PYROXD2Q8N2H3 581 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 CCDC33Q8N5R6 958 aa8.13□□□□□ -1.11
TRAPPC12-221ENST00000489032 ALLCQ8N6M5 410 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms