RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 TMED2Q15363 201 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 DUOXA1Q1HG43 343 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 INSCQ1MX18 579 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 ALG11Q2TAA5 492 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 RBM20Q5T481 1227 aaKnown RBP12.15□□□□□ -0.46
TRAIP-209ENST00000488860 GRTP1Q5TC63 336 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 PEAR1Q5VY43 1037 aaPredicted RBP12.15□□□□□ -0.46
TRAIP-209ENST00000488860 LAIR1Q6GTX8 287 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 TMEM220Q6QAJ8 160 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 TAOK1Q7L7X3 1001 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 RABEPKQ7Z6M1 372 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 GALNT7Q86SF2 657 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 LRRTM4Q86VH4 590 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 ZC3HC1Q86WB0 502 aaKnown RBP12.15□□□□□ -0.46
TRAIP-209ENST00000488860 SPATS2Q86XZ4 545 aaKnown RBP12.15□□□□□ -0.46
TRAIP-209ENST00000488860 DCP2Q8IU60 420 aaKnown RBP12.15□□□□□ -0.46
TRAIP-209ENST00000488860 KRT222Q8N1A0 295 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 LKAAEAR1Q8TD35 194 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 SLC44A1Q8WWI5 657 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 VPS39Q96JC1 886 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 OR2M4Q96R27 311 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 RUFY1Q96T51 708 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 AARSD1Q9BTE6 412 aaKnown RBP12.15□□□□□ -0.46
TRAIP-209ENST00000488860 TSSK1BQ9BXA7 367 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 IRF2BPLQ9H1B7 796 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 P2RY12Q9H244 342 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 RHOJQ9H4E5 214 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 SMOC1Q9H4F8 434 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 CAAP1Q9H8G2 361 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 SARS2Q9NP81 518 aaKnown RBP12.15□□□□□ -0.46
TRAIP-209ENST00000488860 GPR27Q9NS67 375 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 DNAJC28Q9NX36 388 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 CTNNAL1Q9UBT7 734 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 GMEB2Q9UKD1 530 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 SLC17A4Q9Y2C5 497 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 ANKRD6Q9Y2G4 727 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 HCN4Q9Y3Q4 1203 aa12.15□□□□□ -0.46
TRAIP-209ENST00000488860 PCYT1BQ9Y5K3 369 aaPredicted RBP12.15□□□□□ -0.46
TRAIP-209ENST00000488860 CACNA1EQ15878 2313 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 FAM95CA0A1B0GW59 222 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 TLDC2A0PJX2 215 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 F8W8V4 182 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 QSOX1O00391 747 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 DNAJC6O75061 913 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 AP2A2O94973 939 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 TNFP01375 233 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 FTH1P02794 183 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 ESR1P03372 595 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 ACP5P13686 325 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 PKMP14618 531 aaKnown RBP12.14□□□□□ -0.47
TRAIP-209ENST00000488860 RPS3P23396 243 aaKnown RBP eCLIP12.14□□□□□ -0.47
TRAIP-209ENST00000488860 GCAP28676 217 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 SPRP35270 261 aaPredicted RBP12.14□□□□□ -0.47
TRAIP-209ENST00000488860 HOXD12P35452 270 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 PRLHRP49683 370 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 LIMK2P53671 638 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 GRIK2Q13002 908 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 EIF2B5Q13144 721 aaKnown RBP12.14□□□□□ -0.47
TRAIP-209ENST00000488860 CASP8Q14790 479 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 BCL7AQ4VC05 210 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 TRIM61Q5EBN2 209 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 FAM45BPQ6NSW5 357 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 ZNF549Q6P9A3 640 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 CHST15Q7LFX5 561 aaPredicted RBP12.14□□□□□ -0.47
TRAIP-209ENST00000488860 PHACTR4Q8IZ21 702 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 CEP76Q8TAP6 659 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 FAM45AQ8TCE6 357 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 DCAKDQ8WVC6 231 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 LOXL4Q96JB6 756 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 ZIM3Q96PE6 472 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 RMI1Q9H9A7 625 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 TM7SF3Q9NS93 570 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 PSMC3IPQ9P2W1 217 aaPredicted RBP12.14□□□□□ -0.47
TRAIP-209ENST00000488860 APOBEC3BQ9UH17 382 aaKnown RBP12.14□□□□□ -0.47
TRAIP-209ENST00000488860 TBK1Q9UHD2 729 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 TSR3Q9UJK0 312 aaKnown RBP12.14□□□□□ -0.47
TRAIP-209ENST00000488860 PNMA8BQ9ULN7 279 aaPredicted RBP12.14□□□□□ -0.47
TRAIP-209ENST00000488860 CORO1CQ9ULV4 474 aaPredicted RBP12.14□□□□□ -0.47
TRAIP-209ENST00000488860 PCDHGA5Q9Y5G8 931 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 SNX11Q9Y5W9 270 aa12.14□□□□□ -0.47
TRAIP-209ENST00000488860 GPR89AB7ZAQ6 455 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 H3BM21 787 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 H3BMM5 538 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 TNFRSF10CO14798 259 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 KMOO15229 486 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 SGTAO43765 313 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 VPS26AO75436 327 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 ITGA2BP08514 1039 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 GPR89BP0CG08 455 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 JUNDP17535 347 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 CHRM3P20309 590 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 SERPINB9P50453 376 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 SLC12A2P55011 1212 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 BOP1Q14137 746 aaKnown RBP12.13□□□□□ -0.47
TRAIP-209ENST00000488860 KIF19Q2TAC6 998 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 KRT71Q3SY84 523 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 SYTL3Q4VX76 610 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 PYCR3Q53H96 274 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 PRAMEF14Q5SWL7 426 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 MROH9Q5TGP6 573 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms