RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 PPP1R3DO95685 299 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 BCL10O95999 233 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 GH2P01242 217 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 ADRB2P07550 413 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 ITGA2P17301 1181 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 NMBRP28336 390 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 FASLGP48023 281 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 STAT2P52630 851 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 ART1P52961 327 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 PNLIPRP2P54317 469 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 ERVFC1-1P60608 527 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 RELQ04864 619 aaPredicted RBP3.16□□□□□ -1.9
CD46-215ENST00000488596 TNFAIP1Q13829 316 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 MEP1AQ16819 746 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 SYT16Q17RD7 645 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 FAM76BQ5HYJ3 339 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 GARNL3Q5VVW2 1013 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 C16orf82Q7Z2V1 217 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 TMEM219Q86XT9 240 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 RNF113BQ8IZP6 322 aaKnown RBP3.16□□□□□ -1.9
CD46-215ENST00000488596 C1orf87Q8N0U7 546 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 SLC5A8Q8N695 610 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 LSMEM1Q8N8F7 131 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 SLC38A9Q8NBW4 561 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 BBS10Q8TAM1 723 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 MAGEC3Q8TD91 643 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 SLC38A5Q8WUX1 472 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 FIG4Q92562 907 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 PIGTQ969N2 578 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 MOAP1Q96BY2 351 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 CEP295NLQ96MC4 621 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 QRFPRQ96P65 431 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 CDRT15Q96T59 188 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 KIFC3Q9BVG8 833 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 OSGEPL1Q9H4B0 414 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 TMEM30AQ9NV96 361 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 TAS2R14Q9NYV8 317 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 ZNF224Q9NZL3 707 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 KLHL9Q9P2J3 617 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 POLG2Q9UHN1 485 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 RALYQ9UKM9 306 aaKnown RBP3.16□□□□□ -1.9
CD46-215ENST00000488596 OR2W1Q9Y3N9 320 aa3.16□□□□□ -1.9
CD46-215ENST00000488596 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.16□□□□□ -1.9
CD46-215ENST00000488596 LNP1A1A4G5 178 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 SYNDIG1LA6NDD5 238 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 PLK4O00444 970 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 CLGNO14967 610 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 LDB3O75112 727 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 NR2F1P10589 423 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 HLA-DOBP13765 273 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 PRLRP16471 622 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 GNL1P36915 607 aaPredicted RBP3.15□□□□□ -1.91
CD46-215ENST00000488596 AMPHP49418 695 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 ZBTB17Q13105 803 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 SNTA1Q13424 505 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 GRAPQ13588 217 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 GTF2H2Q13888 395 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 KRT33BQ14525 404 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 KIF19Q2TAC6 998 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 FAM98BQ52LJ0 330 aaKnown RBP3.15□□□□□ -1.91
CD46-215ENST00000488596 GPR139Q6DWJ6 353 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 GTF2H2CQ6P1K8 395 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 GFRALQ6UXV0 394 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.15□□□□□ -1.918e-14■■■□□ 14.8
CD46-215ENST00000488596 TPRG1Q6ZUI0 275 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 DNAAF5Q86Y56 855 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 GALNT13Q8IUC8 556 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 EPHX4Q8IUS5 362 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 TBC1D16Q8TBP0 767 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 ZFAND2BQ8WV99 257 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 PRPF31Q8WWY3 499 aaKnown RBP3.15□□□□□ -1.91
CD46-215ENST00000488596 TMCO6Q96DC7 493 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 ERP27Q96DN0 273 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 CDCA5Q96FF9 252 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 BICD1Q96G01 975 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 HGH1Q9BTY7 390 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 APOL6Q9BWW8 343 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 SEMA6AQ9H2E6 1030 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 LRMDAQ9H2I8 198 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 UBTD1Q9HAC8 227 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 CHMP1AQ9HD42 196 aaPredicted RBP3.15□□□□□ -1.91
CD46-215ENST00000488596 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.15□□□□□ -1.913e-7■■■■■ 37
CD46-215ENST00000488596 TRMT1Q9NXH9 659 aaKnown RBP3.15□□□□□ -1.91
CD46-215ENST00000488596 HACL1Q9UJ83 578 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 VDAC3Q9Y277 283 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 AMDHD2Q9Y303 409 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 TTLL3Q9Y4R7 772 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 FAM169AQ9Y6X4 670 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 PASKQ96RG2 1323 aa3.15□□□□□ -1.91
CD46-215ENST00000488596 SAA2-SAA4A0A096LPE2 208 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 A0A1W2PP11 408 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 hCG_1809904A0A1W2PP81 198 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 A0A1W2PPE2 198 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 A0A1W2PR64 198 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 MAGEA13PA6NCF6 341 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 LILRA5A6NI73 299 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 SMTNL1A8MU46 457 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 WISP2O76076 250 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 DNTTP04053 509 aa3.14□□□□□ -1.91
CD46-215ENST00000488596 CDH1P12830 882 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms