RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 REEP2Q9BRK0 252 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 FAM167BQ9BTA0 163 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 RPP25Q9BUL9 199 aaKnown RBP2.68□□□□□ -1.98
SMC4-220ENST00000488017 TRAF4Q9BUZ4 470 aaPredicted RBP2.68□□□□□ -1.98
SMC4-220ENST00000488017 RTN4RQ9BZR6 473 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 SIL1Q9H173 461 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 PANK3Q9H999 370 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 LRWD1Q9UFC0 647 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 CELA1Q9UNI1 258 aa2.68□□□□□ -1.98
SMC4-220ENST00000488017 IGHV3OR16-10A0A075B7F0 116 aa2.67□□□□□ -1.98
SMC4-220ENST00000488017 USP17L23D6RBM5 183 aa2.67□□□□□ -1.98
SMC4-220ENST00000488017 F5H423 210 aaPredicted RBP2.67□□□□□ -1.98
SMC4-220ENST00000488017 GPR137BO60478 399 aa2.67□□□□□ -1.98
SMC4-220ENST00000488017 GUCY1B2O75343 617 aa2.67□□□□□ -1.98
SMC4-220ENST00000488017 KRT19P08727 400 aa2.67□□□□□ -1.98
SMC4-220ENST00000488017 ACADMP11310 421 aa2.67□□□□□ -1.98
SMC4-220ENST00000488017 ITIH1P19827 911 aa2.67□□□□□ -1.98
SMC4-220ENST00000488017 POSTNQ15063 836 aa2.67□□□□□ -1.98
SMC4-220ENST00000488017 RAB6CQ53S08 254 aa2.67□□□□□ -1.98
SMC4-220ENST00000488017 FAM166AQ6J272 317 aa2.67□□□□□ -1.98
SMC4-220ENST00000488017 KRTAP11-1Q8IUC1 163 aa2.67□□□□□ -1.98
SMC4-220ENST00000488017 TMEM178AQ8NBL3 297 aa2.67□□□□□ -1.98
SMC4-220ENST00000488017 PPP4R1Q8TF05 950 aa2.67□□□□□ -1.98
SMC4-220ENST00000488017 POF1BQ8WVV4 589 aa2.67□□□□□ -1.98
SMC4-220ENST00000488017 GTF3AQ92664 365 aaKnown RBP2.67□□□□□ -1.98
SMC4-220ENST00000488017 GLIS2Q9BZE0 524 aaPredicted RBP2.67□□□□□ -1.98
SMC4-220ENST00000488017 RAB6CQ9H0N0 254 aa2.67□□□□□ -1.98
SMC4-220ENST00000488017 SLC25A18Q9H1K4 315 aa2.67□□□□□ -1.98
SMC4-220ENST00000488017 ABCB10Q9NRK6 738 aa2.67□□□□□ -1.98
SMC4-220ENST00000488017 RNF186Q9NXI6 227 aa2.67□□□□□ -1.98
SMC4-220ENST00000488017 ERAP1Q9NZ08 941 aa2.67□□□□□ -1.98
SMC4-220ENST00000488017 ZDHHC2Q9UIJ5 367 aa2.67□□□□□ -1.98
SMC4-220ENST00000488017 AAR2Q9Y312 384 aaKnown RBP2.67□□□□□ -1.98
SMC4-220ENST00000488017 SMCHD1A6NHR9 2005 aa2.66□□□□□ -1.98
SMC4-220ENST00000488017 CCDC194A0A1B0GVG4 234 aa2.66□□□□□ -1.98
SMC4-220ENST00000488017 EPM2AB3EWF7 344 aa2.66□□□□□ -1.98
SMC4-220ENST00000488017 IFNL4K9M1U5 179 aa2.66□□□□□ -1.98
SMC4-220ENST00000488017 CDAP32320 146 aa2.66□□□□□ -1.98
SMC4-220ENST00000488017 GNAQP50148 359 aa2.66□□□□□ -1.98
SMC4-220ENST00000488017 PAPOLAP51003 745 aaKnown RBP2.66□□□□□ -1.98
SMC4-220ENST00000488017 CDH15P55291 814 aa2.66□□□□□ -1.98
SMC4-220ENST00000488017 HNRNPDQ14103 355 aaKnown RBP2.66□□□□□ -1.98
SMC4-220ENST00000488017 EFR3AQ14156 821 aa2.66□□□□□ -1.98
SMC4-220ENST00000488017 NECTIN1Q15223 517 aa2.66□□□□□ -1.98
SMC4-220ENST00000488017 NDUFAF5Q5TEU4 345 aa2.66□□□□□ -1.98
SMC4-220ENST00000488017 FASTKD5Q7L8L6 764 aaKnown RBP2.66□□□□□ -1.98
SMC4-220ENST00000488017 SLC16A9Q7RTY1 509 aa2.66□□□□□ -1.98
SMC4-220ENST00000488017 HPS6Q86YV9 775 aa2.66□□□□□ -1.98
SMC4-220ENST00000488017 SPICE1Q8N0Z3 855 aa2.66□□□□□ -1.98
SMC4-220ENST00000488017 SLC34A3Q8N130 599 aa2.66□□□□□ -1.98
SMC4-220ENST00000488017 PAF1Q8N7H5 531 aa2.66□□□□□ -1.98
SMC4-220ENST00000488017 PPP1R13BQ96KQ4 1090 aa2.66□□□□□ -1.98
SMC4-220ENST00000488017 HARBI1Q96MB7 349 aa2.66□□□□□ -1.98
SMC4-220ENST00000488017 KRT12Q99456 494 aa2.66□□□□□ -1.98
SMC4-220ENST00000488017 CLEC7AQ9BXN2 247 aa2.66□□□□□ -1.98
SMC4-220ENST00000488017 INTS2Q9H0H0 1204 aaKnown RBP2.66□□□□□ -1.98
SMC4-220ENST00000488017 PTTG2Q9NZH5 202 aa2.66□□□□□ -1.98
SMC4-220ENST00000488017 CROCCQ5TZA2 2017 aa2.65□□□□□ -1.99
SMC4-220ENST00000488017 TEX13CA0A0J9YWL9 993 aa2.65□□□□□ -1.99
SMC4-220ENST00000488017 MEX3AA1L020 520 aaKnown RBP2.65□□□□□ -1.99
SMC4-220ENST00000488017 TTC36A6NLP5 189 aa2.65□□□□□ -1.99
SMC4-220ENST00000488017 SOCS3O14543 225 aa2.65□□□□□ -1.99
SMC4-220ENST00000488017 IGHV3-13P01766 116 aa2.65□□□□□ -1.99
SMC4-220ENST00000488017 HUNKP57058 714 aa2.65□□□□□ -1.99
SMC4-220ENST00000488017 DRAP1Q14919 205 aaPredicted RBP2.65□□□□□ -1.99
SMC4-220ENST00000488017 RRS1Q15050 365 aaKnown RBP2.65□□□□□ -1.99
SMC4-220ENST00000488017 P2RY6Q15077 328 aa2.65□□□□□ -1.99
SMC4-220ENST00000488017 IL27RAQ6UWB1 636 aa2.65□□□□□ -1.99
SMC4-220ENST00000488017 C2CD5Q86YS7 1000 aa2.65□□□□□ -1.99
SMC4-220ENST00000488017 PM20D2Q8IYS1 436 aa2.65□□□□□ -1.99
SMC4-220ENST00000488017 NGEFQ8N5V2 710 aa2.65□□□□□ -1.99
SMC4-220ENST00000488017 SLC39A13Q96H72 371 aa2.65□□□□□ -1.99
SMC4-220ENST00000488017 UPF3AQ9H1J1 476 aaKnown RBP2.65□□□□□ -1.99
SMC4-220ENST00000488017 FLRT3Q9NZU0 649 aa2.65□□□□□ -1.99
SMC4-220ENST00000488017 TAGLN3Q9UI15 199 aa2.65□□□□□ -1.99
SMC4-220ENST00000488017 YIPF1Q9Y548 306 aa2.65□□□□□ -1.99
SMC4-220ENST00000488017 ZNF646O15015 1829 aaPredicted RBP2.65□□□□□ -1.99
SMC4-220ENST00000488017 KHDRBS3O75525 346 aaKnown RBP2.64□□□□□ -1.99
SMC4-220ENST00000488017 CDC123O75794 336 aaPredicted RBP2.64□□□□□ -1.99
SMC4-220ENST00000488017 MLYCDO95822 493 aa2.64□□□□□ -1.99
SMC4-220ENST00000488017 MMP15P51511 669 aa2.64□□□□□ -1.99
SMC4-220ENST00000488017 CTSCP53634 463 aa2.64□□□□□ -1.99
SMC4-220ENST00000488017 MFAP5Q13361 173 aa2.64□□□□□ -1.99
SMC4-220ENST00000488017 PDCD2Q16342 344 aaPredicted RBP2.64□□□□□ -1.99
SMC4-220ENST00000488017 RNF212Q495C1 297 aa2.64□□□□□ -1.99
SMC4-220ENST00000488017 KRTAP5-7Q6L8G8 165 aa2.64□□□□□ -1.99
SMC4-220ENST00000488017 Q6ZVH6 145 aa2.64□□□□□ -1.99
SMC4-220ENST00000488017 TBC1D1Q86TI0 1168 aaPredicted RBP2.64□□□□□ -1.99
SMC4-220ENST00000488017 MARCH9Q86YJ5 346 aa2.64□□□□□ -1.99
SMC4-220ENST00000488017 ENAHQ8N8S7 591 aaPredicted RBP2.64□□□□□ -1.99
SMC4-220ENST00000488017 VPS37AQ8NEZ2 397 aa2.64□□□□□ -1.99
SMC4-220ENST00000488017 ZFAND2BQ8WV99 257 aa2.64□□□□□ -1.99
SMC4-220ENST00000488017 SMPDL3BQ92485 455 aa2.64□□□□□ -1.99
SMC4-220ENST00000488017 IGSF8Q969P0 613 aa2.64□□□□□ -1.99
SMC4-220ENST00000488017 WWTR1Q9GZV5 400 aa2.64□□□□□ -1.99
SMC4-220ENST00000488017 UBA2Q9UBT2 640 aaPredicted RBP2.64□□□□□ -1.99
SMC4-220ENST00000488017 OR14J1Q9UGF5 321 aa2.64□□□□□ -1.99
SMC4-220ENST00000488017 TDRD15B5MCY1 1934 aaKnown RBP2.64□□□□□ -1.99
SMC4-220ENST00000488017 hCG_1642624A0A1W2PR95 340 aa2.63□□□□□ -1.99
SMC4-220ENST00000488017 ZNF197O14709 1029 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms