RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 ARCN1P48444 511 aaKnown RBP4.24□□□□□ -1.73
PTEN-204ENST00000487939 RPL24P83731 157 aaKnown RBP4.24□□□□□ -1.73
PTEN-204ENST00000487939 RUNX1T1Q06455 604 aa4.24□□□□□ -1.73
PTEN-204ENST00000487939 HYAL1Q12794 435 aa4.24□□□□□ -1.73
PTEN-204ENST00000487939 MEP1AQ16819 746 aa4.24□□□□□ -1.73
PTEN-204ENST00000487939 ASPRV1Q53RT3 343 aa4.24□□□□□ -1.73
PTEN-204ENST00000487939 HYIQ5T013 277 aa4.24□□□□□ -1.73
PTEN-204ENST00000487939 KIAA0930Q6ICG6 404 aaPredicted RBP4.24□□□□□ -1.73
PTEN-204ENST00000487939 C19orf48Q6RUI8 117 aa4.24□□□□□ -1.73
PTEN-204ENST00000487939 Q75L30 129 aa4.24□□□□□ -1.73
PTEN-204ENST00000487939 ATG9AQ7Z3C6 839 aa4.24□□□□□ -1.73
PTEN-204ENST00000487939 CTAGE4Q8IX94 777 aa4.24□□□□□ -1.73
PTEN-204ENST00000487939 MAK16Q9BXY0 300 aaKnown RBP4.24□□□□□ -1.73
PTEN-204ENST00000487939 RAD21L1Q9H4I0 556 aa4.24□□□□□ -1.73
PTEN-204ENST00000487939 BLOC1S4Q9NUP1 217 aa4.24□□□□□ -1.73
PTEN-204ENST00000487939 MAP3K20Q9NYL2 800 aaKnown RBP4.24□□□□□ -1.73
PTEN-204ENST00000487939 RCC2Q9P258 522 aaKnown RBP4.24□□□□□ -1.73
PTEN-204ENST00000487939 EXO1Q9UQ84 846 aaKnown RBP4.24□□□□□ -1.73
PTEN-204ENST00000487939 NOTCH4Q99466 2003 aa4.24□□□□□ -1.73
PTEN-204ENST00000487939 ZNF644Q9H582 1327 aaPredicted RBP4.23□□□□□ -1.73
PTEN-204ENST00000487939 FSD2A1L4K1 749 aa4.23□□□□□ -1.73
PTEN-204ENST00000487939 ANKRD18BA2A2Z9 1011 aa4.23□□□□□ -1.73
PTEN-204ENST00000487939 FAM72CH0Y354 149 aa4.23□□□□□ -1.73
PTEN-204ENST00000487939 PLPP2O43688 288 aa4.23□□□□□ -1.73
PTEN-204ENST00000487939 GH2P01242 217 aa4.23□□□□□ -1.73
PTEN-204ENST00000487939 MCCP23508 829 aa4.23□□□□□ -1.73
PTEN-204ENST00000487939 HRH2P25021 359 aa4.23□□□□□ -1.73
PTEN-204ENST00000487939 HADHAP40939 763 aa4.23□□□□□ -1.73
PTEN-204ENST00000487939 EIF5P55010 431 aaKnown RBP4.23□□□□□ -1.73
PTEN-204ENST00000487939 DRG2P55039 364 aaKnown RBP4.23□□□□□ -1.73
PTEN-204ENST00000487939 SIM2Q14190 667 aaPredicted RBP4.23□□□□□ -1.73
PTEN-204ENST00000487939 FAM72AQ5TYM5 149 aa4.23□□□□□ -1.73
PTEN-204ENST00000487939 FAM72DQ6L9T8 149 aa4.23□□□□□ -1.73
PTEN-204ENST00000487939 PACS1Q6VY07 963 aa4.23□□□□□ -1.73
PTEN-204ENST00000487939 RAD9BQ6WBX8 426 aa4.23□□□□□ -1.73
PTEN-204ENST00000487939 SLC26A9Q7LBE3 791 aa4.23□□□□□ -1.73
PTEN-204ENST00000487939 GALNT5Q7Z7M9 940 aa4.23□□□□□ -1.73
PTEN-204ENST00000487939 FAM72BQ86X60 149 aa4.23□□□□□ -1.73
PTEN-204ENST00000487939 SLC24A4Q8NFF2 622 aa4.23□□□□□ -1.73
PTEN-204ENST00000487939 NEUROD6Q96NK8 337 aa4.23□□□□□ -1.73
PTEN-204ENST00000487939 KRTAP2-2Q9BYT5 123 aa4.23□□□□□ -1.73
PTEN-204ENST00000487939 UPF2Q9HAU5 1272 aaKnown RBP4.23□□□□□ -1.73
PTEN-204ENST00000487939 KLHL9Q9P2J3 617 aa4.23□□□□□ -1.73
PTEN-204ENST00000487939 FAF1Q9UNN5 650 aaPredicted RBP4.23□□□□□ -1.73
PTEN-204ENST00000487939 YIPF1Q9Y548 306 aa4.23□□□□□ -1.73
PTEN-204ENST00000487939 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.23□□□□□ -1.73
PTEN-204ENST00000487939 LRRC72A6NJI9 287 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 DOK2O60496 412 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 ZNF217O75362 1048 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 TSPAN9O75954 239 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 PRSS1P07477 247 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 GARSP41250 739 aaKnown RBP4.22□□□□□ -1.73
PTEN-204ENST00000487939 MRPS5P82675 430 aaKnown RBP4.22□□□□□ -1.73
PTEN-204ENST00000487939 GAGE2BQ13066 116 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 KCNC3Q14003 757 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 GAGE2EQ4V326 116 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 RAB6CQ53S08 254 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 PLEKHS1Q5SXH7 462 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 ITPRIPL1Q6GPH6 555 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 GAGE2AQ6NT46 116 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 USP43Q70EL4 1123 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 LONP2Q86WA8 852 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 SCYL3Q8IZE3 742 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 GBGT1Q8N5D6 347 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 LRRC8CQ8TDW0 803 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 FAM120BQ96EK7 910 aaKnown RBP4.22□□□□□ -1.73
PTEN-204ENST00000487939 SAT2Q96F10 170 aaPredicted RBP4.22□□□□□ -1.73
PTEN-204ENST00000487939 RAB6CQ9H0N0 254 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 DNAJC18Q9H819 358 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 HAUS2Q9NVX0 235 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 GAGE2DQ9UEU5 116 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 ZNF215Q9UL58 517 aaPredicted RBP4.22□□□□□ -1.73
PTEN-204ENST00000487939 TCF19Q9Y242 345 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 B3GALT5Q9Y2C3 310 aa4.22□□□□□ -1.73
PTEN-204ENST00000487939 A6NCN8 305 aa4.21□□□□□ -1.74
PTEN-204ENST00000487939 H0YIN7 160 aa4.21□□□□□ -1.74
PTEN-204ENST00000487939 TMEM189-UBE2V1I3L0A0 370 aa4.21□□□□□ -1.74
PTEN-204ENST00000487939 J3QR06 171 aa4.21□□□□□ -1.74
PTEN-204ENST00000487939 MITFO75030 526 aaPredicted RBP4.21□□□□□ -1.74
PTEN-204ENST00000487939 SLC22A3O75751 556 aa4.21□□□□□ -1.74
PTEN-204ENST00000487939 BMP10O95393 424 aa4.21□□□□□ -1.74
PTEN-204ENST00000487939 SP1P08047 785 aa4.21□□□□□ -1.74
PTEN-204ENST00000487939 PAX1P15863 534 aa4.21□□□□□ -1.74
PTEN-204ENST00000487939 MFAP4P55083 255 aa4.21□□□□□ -1.74
PTEN-204ENST00000487939 CD81P60033 236 aa4.21□□□□□ -1.74
PTEN-204ENST00000487939 MC1RQ01726 317 aa4.21□□□□□ -1.74
PTEN-204ENST00000487939 SPOCK1Q08629 439 aa4.21□□□□□ -1.74
PTEN-204ENST00000487939 UBE2V1Q13404 147 aa4.21□□□□□ -1.74
PTEN-204ENST00000487939 TMEM198Q66K66 360 aa4.21□□□□□ -1.74
PTEN-204ENST00000487939 MEX3BQ6ZN04 569 aaKnown RBP4.21□□□□□ -1.74
PTEN-204ENST00000487939 ZNF534Q76KX8 674 aa4.21□□□□□ -1.74
PTEN-204ENST00000487939 ZNF329Q86UD4 541 aa4.21□□□□□ -1.74
PTEN-204ENST00000487939 SPATA3Q8NHX4 192 aa4.21□□□□□ -1.74
PTEN-204ENST00000487939 OXNAD1Q96HP4 312 aaPredicted RBP4.21□□□□□ -1.74
PTEN-204ENST00000487939 ST6GAL2Q96JF0 529 aa4.21□□□□□ -1.74
PTEN-204ENST00000487939 DDOQ99489 341 aa4.21□□□□□ -1.74
PTEN-204ENST00000487939 GFI1Q99684 422 aa4.21□□□□□ -1.74
PTEN-204ENST00000487939 BARD1Q99728 777 aaKnown RBP4.21□□□□□ -1.74
PTEN-204ENST00000487939 SDF4Q9BRK5 362 aa4.21□□□□□ -1.74
PTEN-204ENST00000487939 HRH4Q9H3N8 390 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms