RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 RARRES3Q9UL19 164 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 MYO6Q9UM54 1294 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 SCINQ9Y6U3 715 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 APCP25054 2843 aa15.06■□□□□ 0
MCF2L-228ENST00000487354 PCM1Q15154 2024 aa15.05■□□□□ 0
MCF2L-228ENST00000487354 PDZK1P1A8MUH7 402 aa15.05■□□□□ -0
MCF2L-228ENST00000487354 SLC25A14O95258 325 aaPredicted RBP15.05■□□□□ -0
MCF2L-228ENST00000487354 LPOP22079 712 aaPredicted RBP15.05■□□□□ -0
MCF2L-228ENST00000487354 CES1P23141 567 aa15.05■□□□□ -0
MCF2L-228ENST00000487354 ZNF165P49910 485 aa15.05■□□□□ -0
MCF2L-228ENST00000487354 GALNT3Q14435 633 aa15.05■□□□□ -0
MCF2L-228ENST00000487354 CHRNA6Q15825 494 aa15.05■□□□□ -0
MCF2L-228ENST00000487354 RBM43Q6ZSC3 357 aaKnown RBP15.05■□□□□ -0
MCF2L-228ENST00000487354 LRRTM4Q86VH4 590 aa15.05■□□□□ -0
MCF2L-228ENST00000487354 CPNE8Q86YQ8 564 aa15.05■□□□□ -0
MCF2L-228ENST00000487354 NIPA2Q8N8Q9 360 aa15.05■□□□□ -0
MCF2L-228ENST00000487354 FDCSPQ8NFU4 85 aa15.05■□□□□ -0
MCF2L-228ENST00000487354 SEC14L1Q92503 715 aa15.05■□□□□ -0
MCF2L-228ENST00000487354 C19orf60Q96EN9 201 aa15.05■□□□□ -0
MCF2L-228ENST00000487354 ZDHHC12Q96GR4 267 aa15.05■□□□□ -0
MCF2L-228ENST00000487354 SPATA16Q9BXB7 569 aa15.05■□□□□ -0
MCF2L-228ENST00000487354 PDE7BQ9NP56 450 aa15.05■□□□□ -0
MCF2L-228ENST00000487354 ACSS2Q9NR19 701 aa15.05■□□□□ -0
MCF2L-228ENST00000487354 MYO1AQ9UBC5 1043 aa15.05■□□□□ -0
MCF2L-228ENST00000487354 TTLL3Q9Y4R7 772 aa15.05■□□□□ -0
MCF2L-228ENST00000487354 NUP210LQ5VU65 1888 aa15.05■□□□□ -0
MCF2L-228ENST00000487354 SEC16AO15027 2179 aa15.05■□□□□ -0
MCF2L-228ENST00000487354 POLEQ07864 2286 aa15.05■□□□□ -0
MCF2L-228ENST00000487354 CSMD2Q7Z408 3487 aa15.04■□□□□ -0
MCF2L-228ENST00000487354 KMOO15229 486 aa15.04■□□□□ -0
MCF2L-228ENST00000487354 KRT86O43790 486 aa15.04■□□□□ -0
MCF2L-228ENST00000487354 CCDC172P0C7W6 258 aa15.04■□□□□ -0
MCF2L-228ENST00000487354 PIRTP0C851 137 aa15.04■□□□□ -0
MCF2L-228ENST00000487354 CCNCP24863 283 aa15.04■□□□□ -0
MCF2L-228ENST00000487354 PRKCIP41743 596 aa15.04■□□□□ -0
MCF2L-228ENST00000487354 CD86P42081 329 aa15.04■□□□□ -0
MCF2L-228ENST00000487354 DPYSL3Q14195 570 aa15.04■□□□□ -0
MCF2L-228ENST00000487354 IZUMO3Q5VZ72 239 aa15.04■□□□□ -0
MCF2L-228ENST00000487354 RBM12BQ8IXT5 1001 aaKnown RBP15.04■□□□□ -0
MCF2L-228ENST00000487354 TRAM1L1Q8N609 369 aa15.04■□□□□ -0
MCF2L-228ENST00000487354 CNTD1Q8N815 330 aa15.04■□□□□ -0
MCF2L-228ENST00000487354 SIDT2Q8NBJ9 832 aaKnown RBP15.04■□□□□ -0
MCF2L-228ENST00000487354 PRR7Q8TB68 274 aa15.04■□□□□ -0
MCF2L-228ENST00000487354 UBXN4Q92575 508 aa15.04■□□□□ -0
MCF2L-228ENST00000487354 ZNF514Q96K75 400 aaPredicted RBP15.04■□□□□ -0
MCF2L-228ENST00000487354 MAP3K3Q99759 626 aa15.04■□□□□ -0
MCF2L-228ENST00000487354 ZSCAN5AQ9BUG6 496 aa15.04■□□□□ -0
MCF2L-228ENST00000487354 MLPHQ9BV36 600 aaPredicted RBP15.04■□□□□ -0
MCF2L-228ENST00000487354 MFRPQ9BY79 579 aa15.04■□□□□ -0
MCF2L-228ENST00000487354 ISCUQ9H1K1 167 aa15.04■□□□□ -0
MCF2L-228ENST00000487354 ZNF451Q9Y4E5 1061 aa15.04■□□□□ -0
MCF2L-228ENST00000487354 PCDHGB7Q9Y5F8 929 aa15.04■□□□□ -0
MCF2L-228ENST00000487354 JCHAINP01591 159 aa15.03■□□□□ -0
MCF2L-228ENST00000487354 CAPN1P07384 714 aa15.03■□□□□ -0
MCF2L-228ENST00000487354 POU3F2P20265 443 aaPredicted RBP15.03■□□□□ -0
MCF2L-228ENST00000487354 FECHP22830 423 aa15.03■□□□□ -0
MCF2L-228ENST00000487354 ITGA1P56199 1179 aa15.03■□□□□ -0
MCF2L-228ENST00000487354 GBE1Q04446 702 aa15.03■□□□□ -0
MCF2L-228ENST00000487354 SLC10A2Q12908 348 aaPredicted RBP15.03■□□□□ -0
MCF2L-228ENST00000487354 ZBTB17Q13105 803 aa15.03■□□□□ -0
MCF2L-228ENST00000487354 IFI16Q16666 785 aaKnown RBP15.03■□□□□ -0
MCF2L-228ENST00000487354 ATP13A4Q4VNC1 1196 aa15.03■□□□□ -0
MCF2L-228ENST00000487354 PRAMEF17Q5VTA0 474 aa15.03■□□□□ -0
MCF2L-228ENST00000487354 C1QL3Q5VWW1 255 aa15.03■□□□□ -0
MCF2L-228ENST00000487354 PDPK2PQ6A1A2 396 aa15.03■□□□□ -0
MCF2L-228ENST00000487354 TIGD7Q6NT04 549 aaPredicted RBP15.03■□□□□ -0
MCF2L-228ENST00000487354 TMC3Q7Z5M5 1100 aa15.03■□□□□ -0
MCF2L-228ENST00000487354 D2HGDHQ8N465 521 aa15.03■□□□□ -0
MCF2L-228ENST00000487354 PQLC3Q8N755 202 aa15.03■□□□□ -0
MCF2L-228ENST00000487354 CCHCR1Q8TD31 782 aa15.03■□□□□ -0
MCF2L-228ENST00000487354 PNPLA2Q96AD5 504 aa15.03■□□□□ -0
MCF2L-228ENST00000487354 ZNF501Q96CX3 271 aaPredicted RBP15.03■□□□□ -0
MCF2L-228ENST00000487354 CHST8Q9H2A9 424 aa15.03■□□□□ -0
MCF2L-228ENST00000487354 ZFYVE1Q9HBF4 777 aa15.03■□□□□ -0
MCF2L-228ENST00000487354 FGF21Q9NSA1 209 aa15.03■□□□□ -0
MCF2L-228ENST00000487354 AIPL1Q9NZN9 384 aa15.03■□□□□ -0
MCF2L-228ENST00000487354 TRIM10Q9UDY6 481 aa15.03■□□□□ -0
MCF2L-228ENST00000487354 SHOC2Q9UQ13 582 aa15.03■□□□□ -0
MCF2L-228ENST00000487354 FARSAQ9Y285 508 aaKnown RBP15.03■□□□□ -0
MCF2L-228ENST00000487354 MDC1Q14676 2089 aaKnown RBP15.02■□□□□ -0
MCF2L-228ENST00000487354 CPNE3O75131 537 aaKnown RBP15.02■□□□□ -0
MCF2L-228ENST00000487354 CBX6O95503 412 aa15.02■□□□□ -0
MCF2L-228ENST00000487354 MYBL1P10243 752 aa15.02■□□□□ -0
MCF2L-228ENST00000487354 BPIP17213 487 aa15.02■□□□□ -0
MCF2L-228ENST00000487354 CA4P22748 312 aa15.02■□□□□ -0
MCF2L-228ENST00000487354 TNFRSF8P28908 595 aa15.02■□□□□ -0
MCF2L-228ENST00000487354 CA5AP35218 305 aa15.02■□□□□ -0
MCF2L-228ENST00000487354 MYL5Q02045 173 aa15.02■□□□□ -0
MCF2L-228ENST00000487354 PIGHQ14442 188 aaPredicted RBP15.02■□□□□ -0
MCF2L-228ENST00000487354 KRT81Q14533 505 aa15.02■□□□□ -0
MCF2L-228ENST00000487354 NR6A1Q15406 480 aa15.02■□□□□ -0
MCF2L-228ENST00000487354 GPR19Q15760 415 aa15.02■□□□□ -0
MCF2L-228ENST00000487354 ASIC2Q16515 512 aa15.02■□□□□ -0
MCF2L-228ENST00000487354 CYB5D1Q6P9G0 228 aa15.02■□□□□ -0
MCF2L-228ENST00000487354 FAM198BQ6UWH4 519 aa15.02■□□□□ -0
MCF2L-228ENST00000487354 FAM83HQ6ZRV2 1179 aaPredicted RBP15.02■□□□□ -0
MCF2L-228ENST00000487354 FAF2Q96CS3 445 aa15.02■□□□□ -0
MCF2L-228ENST00000487354 CXorf40BQ96DE9 158 aa15.02■□□□□ -0
MCF2L-228ENST00000487354 RANBP9Q96S59 729 aa15.02■□□□□ -0
MCF2L-228ENST00000487354 SMAD5Q99717 465 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms