RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ARHGEF19Q8IW93 802 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 SMYD4Q8IYR2 804 aaPredicted RBP11.44□□□□□ -0.58
TRIM56-204ENST00000487252 TC2NQ8N9U0 490 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 NELFBQ8WX92 580 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 ZNF501Q96CX3 271 aaPredicted RBP11.44□□□□□ -0.58
TRIM56-204ENST00000487252 DHTKD1Q96HY7 919 aaPredicted RBP11.44□□□□□ -0.58
TRIM56-204ENST00000487252 NSMCE3Q96MG7 304 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 PCMTD1Q96MG8 357 aaPredicted RBP11.44□□□□□ -0.58
TRIM56-204ENST00000487252 PANX2Q96RD6 677 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 TAAR6Q96RI8 345 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 MLPHQ9BV36 600 aaPredicted RBP11.44□□□□□ -0.58
TRIM56-204ENST00000487252 TUBB2BQ9BVA1 445 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 PDFQ9HBH1 243 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 ACP6Q9NPH0 428 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 VPS18Q9P253 973 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 MAPK8IP1Q9UQF2 711 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 KCNK6Q9Y257 313 aa11.44□□□□□ -0.58
TRIM56-204ENST00000487252 CCDC88CQ9P219 2028 aa11.43□□□□□ -0.58
TRIM56-204ENST00000487252 CCDC78A2IDD5 438 aa11.43□□□□□ -0.58
TRIM56-204ENST00000487252 LRIG2O94898 1065 aa11.43□□□□□ -0.58
TRIM56-204ENST00000487252 LHCGRP22888 699 aa11.43□□□□□ -0.58
TRIM56-204ENST00000487252 PPP1R2P41236 205 aa11.43□□□□□ -0.58
TRIM56-204ENST00000487252 SLC19A1P41440 591 aa11.43□□□□□ -0.58
TRIM56-204ENST00000487252 PRCPP42785 496 aa11.43□□□□□ -0.58
TRIM56-204ENST00000487252 FMO5P49326 533 aa11.43□□□□□ -0.58
TRIM56-204ENST00000487252 STX17P56962 302 aa11.43□□□□□ -0.58
TRIM56-204ENST00000487252 PPP1CAP62136 330 aa11.43□□□□□ -0.58
TRIM56-204ENST00000487252 FOLH1Q04609 750 aa11.43□□□□□ -0.58
TRIM56-204ENST00000487252 PTPN20Q4JDL3 420 aa11.43□□□□□ -0.58
TRIM56-204ENST00000487252 KLHL10Q6JEL2 608 aa11.43□□□□□ -0.58
TRIM56-204ENST00000487252 TRNP1Q6NT89 227 aa11.43□□□□□ -0.58
TRIM56-204ENST00000487252 CHST15Q7LFX5 561 aaPredicted RBP11.43□□□□□ -0.58
TRIM56-204ENST00000487252 SRLQ86TD4 932 aa11.43□□□□□ -0.58
TRIM56-204ENST00000487252 TRIM74Q86UV6 250 aa11.43□□□□□ -0.58
TRIM56-204ENST00000487252 NLRP8Q86W28 1048 aa11.43□□□□□ -0.58
TRIM56-204ENST00000487252 FAM131BQ86XD5 332 aa11.43□□□□□ -0.58
TRIM56-204ENST00000487252 ZDHHC17Q8IUH5 632 aa11.43□□□□□ -0.58
TRIM56-204ENST00000487252 C1orf131Q8NDD1 294 aaKnown RBP11.43□□□□□ -0.58
TRIM56-204ENST00000487252 P4HTMQ9NXG6 502 aa11.43□□□□□ -0.58
TRIM56-204ENST00000487252 SCHIP1Q9P0W5 487 aaPredicted RBP11.43□□□□□ -0.58
TRIM56-204ENST00000487252 ZNF624Q9P2J8 865 aaPredicted RBP11.43□□□□□ -0.58
TRIM56-204ENST00000487252 WASH4PA8MWX3 477 aa11.42□□□□□ -0.58
TRIM56-204ENST00000487252 CETN3O15182 167 aa11.42□□□□□ -0.58
TRIM56-204ENST00000487252 SLC16A3O15427 465 aaKnown RBP11.42□□□□□ -0.58
TRIM56-204ENST00000487252 HEXAP06865 529 aa11.42□□□□□ -0.58
TRIM56-204ENST00000487252 OTX2P32243 289 aa11.42□□□□□ -0.58
TRIM56-204ENST00000487252 ADRA1BP35368 520 aa11.42□□□□□ -0.58
TRIM56-204ENST00000487252 GPR1P46091 355 aa11.42□□□□□ -0.58
TRIM56-204ENST00000487252 YBEYP58557 167 aaPredicted RBP11.42□□□□□ -0.58
TRIM56-204ENST00000487252 KRT31Q15323 416 aa11.42□□□□□ -0.58
TRIM56-204ENST00000487252 FILIP1LQ4L180 1135 aa11.42□□□□□ -0.58
TRIM56-204ENST00000487252 RWDD4Q6NW29 188 aaKnown RBP11.42□□□□□ -0.58
TRIM56-204ENST00000487252 IRGCQ6NXR0 463 aa11.42□□□□□ -0.58
TRIM56-204ENST00000487252 REXO1L1PQ8IX06 675 aa11.42□□□□□ -0.58
TRIM56-204ENST00000487252 SYTL1Q8IYJ3 562 aa11.42□□□□□ -0.58
TRIM56-204ENST00000487252 DNAJB8Q8NHS0 232 aa11.42□□□□□ -0.58
TRIM56-204ENST00000487252 NUDT8Q8WV74 236 aa11.42□□□□□ -0.58
TRIM56-204ENST00000487252 CPT1BQ92523 772 aa11.42□□□□□ -0.58
TRIM56-204ENST00000487252 DHRS4Q9BTZ2 278 aa11.42□□□□□ -0.58
TRIM56-204ENST00000487252 PCMTD2Q9NV79 361 aa11.42□□□□□ -0.58
TRIM56-204ENST00000487252 PCDHGC3Q9UN70 934 aa11.42□□□□□ -0.58
TRIM56-204ENST00000487252 PRKAB1Q9Y478 270 aa11.42□□□□□ -0.58
TRIM56-204ENST00000487252 ANKRD12Q6UB98 2062 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 GOLGA6CA6NDK9 693 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 GOLGA6BA6NDN3 693 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 AKR1B15C9JRZ8 316 aaPredicted RBP11.41□□□□□ -0.58
TRIM56-204ENST00000487252 RRP9O43818 475 aaKnown RBP11.41□□□□□ -0.58
TRIM56-204ENST00000487252 SNX2O60749 519 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 UNC5CO95185 931 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 GOLGA6DP0CG33 693 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 ACP5P13686 325 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 TNFAIP3P21580 790 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 GNA15P30679 374 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 VIPR1P32241 457 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 FLT3P36888 993 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 SCNN1AP37088 669 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 YBX1P67809 324 aaKnown RBP11.41□□□□□ -0.58
TRIM56-204ENST00000487252 HSD11B2P80365 405 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 BCL2L1Q07817 233 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 PRKD1Q15139 912 aaPredicted RBP11.41□□□□□ -0.58
TRIM56-204ENST00000487252 PLA2G4EQ3MJ16 856 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 HSP90AA4PQ58FG1 418 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 TCP11X2Q5H9J9 407 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 PRAMEF17Q5VTA0 474 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 ZNF385CQ66K41 422 aaPredicted RBP11.41□□□□□ -0.58
TRIM56-204ENST00000487252 TTI2Q6NXR4 508 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 MTERF4Q7Z6M4 381 aaKnown RBP11.41□□□□□ -0.58
TRIM56-204ENST00000487252 RTL3Q8N8U3 475 aaKnown RBP11.41□□□□□ -0.58
TRIM56-204ENST00000487252 LRRN4CLQ8ND94 238 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 SHC3Q92529 594 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 CCDC47Q96A33 483 aaKnown RBP11.41□□□□□ -0.58
TRIM56-204ENST00000487252 C18orf12Q96KH6 178 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 GBP5Q96PP8 586 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 ALPK1Q96QP1 1244 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 BAG1Q99933 345 aaPredicted RBP11.41□□□□□ -0.58
TRIM56-204ENST00000487252 NAA15Q9BXJ9 866 aaKnown RBP11.41□□□□□ -0.58
TRIM56-204ENST00000487252 MAGEB5Q9BZ81 275 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 SLC40A1Q9NP59 571 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 ATP13A2Q9NQ11 1180 aa11.41□□□□□ -0.58
TRIM56-204ENST00000487252 TRMT1Q9NXH9 659 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms