RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 CLCNKAP51800 687 aa19.1■□□□□ 0.65
PCOLCE-208ENST00000487172 ADARP55265 1226 aaKnown RBP19.1■□□□□ 0.65
PCOLCE-208ENST00000487172 C1orf61Q13536 156 aa19.1■□□□□ 0.65
PCOLCE-208ENST00000487172 LVRNQ6Q4G3 990 aa19.1■□□□□ 0.65
PCOLCE-208ENST00000487172 LDB1Q86U70 411 aaPredicted RBP19.1■□□□□ 0.65
PCOLCE-208ENST00000487172 GKN2Q86XP6 184 aa19.1■□□□□ 0.65
PCOLCE-208ENST00000487172 CNTN4Q8IWV2 1026 aa19.1■□□□□ 0.65
PCOLCE-208ENST00000487172 UNC5BQ8IZJ1 945 aa19.1■□□□□ 0.65
PCOLCE-208ENST00000487172 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.1■□□□□ 0.65
PCOLCE-208ENST00000487172 UBXN4Q92575 508 aa19.1■□□□□ 0.65
PCOLCE-208ENST00000487172 CCDC97Q96F63 343 aaPredicted RBP19.1■□□□□ 0.65
PCOLCE-208ENST00000487172 C9orf72Q96LT7 481 aa19.1■□□□□ 0.65
PCOLCE-208ENST00000487172 TIMM29Q9BSF4 260 aa19.1■□□□□ 0.65
PCOLCE-208ENST00000487172 GSDMCQ9BYG8 508 aa19.1■□□□□ 0.65
PCOLCE-208ENST00000487172 INTS10Q9NVR2 710 aaKnown RBP19.1■□□□□ 0.65
PCOLCE-208ENST00000487172 UCKL1Q9NWZ5 548 aa19.1■□□□□ 0.65
PCOLCE-208ENST00000487172 IL1RAPL1Q9NZN1 696 aa19.1■□□□□ 0.65
PCOLCE-208ENST00000487172 VPS9D1Q9Y2B5 631 aa19.1■□□□□ 0.65
PCOLCE-208ENST00000487172 CABIN1Q9Y6J0 2220 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 FAM186AA6NE01 2351 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 OR2AG2A6NM03 316 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 PRMT5O14744 637 aaPredicted RBP19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 FLRT2O43155 660 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 NDUFS3O75489 264 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 SPAG6O75602 509 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 ERVK-10P10266 1014 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 RPS3P23396 243 aaKnown RBP eCLIP19.09■□□□□ 0.652e-7■■■■■ 32.8
PCOLCE-208ENST00000487172 SSTR1P30872 391 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 CTBSQ01459 385 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 ILF3Q12906 894 aaKnown RBP eCLIP19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 TRMT10BQ6PF06 316 aaKnown RBP19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 C3orf62Q6ZUJ4 267 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 CHST15Q7LFX5 561 aaPredicted RBP19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 GALNT7Q86SF2 657 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 ALYREFQ86V81 257 aaKnown RBP19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 LRRC6Q86X45 466 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 NRROSQ86YC3 692 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 GATAD2AQ86YP4 633 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 TRAPPC5Q8IUR0 188 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 OTUD6BQ8N6M0 293 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 PNPLA1Q8N8W4 532 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 CCL4L1Q8NHW4 92 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 DUSP23Q9BVJ7 150 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 LRRC4CQ9HCJ2 640 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 IARS2Q9NSE4 1012 aaKnown RBP19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 PRKAB1Q9Y478 270 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 ST14Q9Y5Y6 855 aa19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 ZFHX2Q9C0A1 2572 aaPredicted RBP19.09■□□□□ 0.65
PCOLCE-208ENST00000487172 C17orf113A0A1B0GUU1 675 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 PRR19A6NJB7 356 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 F8W8V4 182 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 YY2O15391 372 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 OR1I1O60431 355 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 POP7O75817 140 aaKnown RBP19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 S1PR4O95977 384 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 GSTM1P09488 218 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 GRK6P43250 576 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 GPX6P59796 221 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 GSTM4Q03013 218 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 DMPKQ09013 629 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 MGAT5Q09328 741 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 SLMAPQ14BN4 828 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 INAVAQ3KP66 663 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 UAP1L1Q3KQV9 507 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 TEDDM1Q5T9Z0 273 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 ZNF470Q6ECI4 717 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 CRTC3Q6UUV7 619 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 KIAA0408Q6ZU52 694 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 DET1Q7L5Y6 550 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 DENND6AQ8IWF6 608 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 CLDN19Q8N6F1 224 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 C2CD4AQ8NCU7 369 aaPredicted RBP19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 LPGAT1Q92604 370 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 P2RY12Q9H244 342 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 NLGN3Q9NZ94 848 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 FBXO5Q9UKT4 447 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 PLEKHM1Q9Y4G2 1056 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 PRSS21Q9Y6M0 314 aa19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 RIF1Q5UIP0 2472 aaKnown RBP19.08■□□□□ 0.64
PCOLCE-208ENST00000487172 ANXA6P08133 673 aa19.07■□□□□ 0.64
PCOLCE-208ENST00000487172 CELA2BP08218 269 aaPredicted RBP19.07■□□□□ 0.64
PCOLCE-208ENST00000487172 OR56A5P0C7T3 313 aa19.07■□□□□ 0.64
PCOLCE-208ENST00000487172 ALPPL2P10696 532 aa19.07■□□□□ 0.64
PCOLCE-208ENST00000487172 AK4P27144 223 aaPredicted RBP19.07■□□□□ 0.64
PCOLCE-208ENST00000487172 SLC1A2P43004 574 aa19.07■□□□□ 0.64
PCOLCE-208ENST00000487172 LEPRP48357 1165 aaKnown RBP19.07■□□□□ 0.64
PCOLCE-208ENST00000487172 CTBP1Q13363 440 aa19.07■□□□□ 0.64
PCOLCE-208ENST00000487172 CCNI2Q6ZMN8 369 aaPredicted RBP19.07■□□□□ 0.64
PCOLCE-208ENST00000487172 TAF8Q7Z7C8 310 aa19.07■□□□□ 0.64
PCOLCE-208ENST00000487172 AMZ2Q86W34 360 aa19.07■□□□□ 0.64
PCOLCE-208ENST00000487172 OR2L2Q8NH16 312 aa19.07■□□□□ 0.64
PCOLCE-208ENST00000487172 OR4C6Q8NH72 309 aa19.07■□□□□ 0.64
PCOLCE-208ENST00000487172 VPS37BQ9H9H4 285 aa19.07■□□□□ 0.64
PCOLCE-208ENST00000487172 PPANQ9NQ55 473 aaKnown RBP19.07■□□□□ 0.64
PCOLCE-208ENST00000487172 SLC23A2Q9UGH3 650 aa19.07■□□□□ 0.64
PCOLCE-208ENST00000487172 DOLKQ9UPQ8 538 aa19.07■□□□□ 0.64
PCOLCE-208ENST00000487172 PCDHB1Q9Y5F3 818 aa19.07■□□□□ 0.64
PCOLCE-208ENST00000487172 TCRBV9S1A1TA0A576 114 aa19.06■□□□□ 0.64
PCOLCE-208ENST00000487172 MGAT4DA6NG13 374 aa19.06■□□□□ 0.64
PCOLCE-208ENST00000487172 ACP5P13686 325 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms