RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 RFTN1Q14699 578 aaPredicted RBP13.23□□□□□ -0.29
HDLBP-241ENST00000487169 MSANTD2Q6P1R3 559 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 CNKSR3Q6P9H4 555 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 RALGPS2Q86X27 583 aaPredicted RBP13.23□□□□□ -0.29
HDLBP-241ENST00000487169 CMTM8Q8IZV2 173 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 FITM2Q8N6M3 262 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 ZNF366Q8N895 744 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 LCN9Q8WX39 176 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 SMOQ99835 787 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 RTKNQ9BST9 563 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 SUV39H2Q9H5I1 410 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 ADGRE2Q9UHX3 823 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 NEMP2A6NFY4 417 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 NBNO60934 754 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 HLA-DQB2P05538 268 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 ITPKBP27987 946 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 OGDHQ02218 1023 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 RALGDSQ12967 914 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 TAF1AQ15573 450 aaPredicted RBP13.23□□□□□ -0.29
HDLBP-241ENST00000487169 DEF8Q6ZN54 512 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 HPS6Q86YV9 775 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 NUAK2Q9H093 628 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 INTS7Q9NVH2 962 aaKnown RBP13.23□□□□□ -0.29
HDLBP-241ENST00000487169 IKZF3Q9UKT9 509 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 CNOT6Q9ULM6 557 aaKnown RBP13.23□□□□□ -0.29
HDLBP-241ENST00000487169 PGM3O95394 542 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 PRKCGP05129 697 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 SLC1A2P43004 574 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 C16orf72Q14CZ0 275 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 ATP13A5Q4VNC0 1218 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 NCBP2-AS2Q69YL0 99 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 GLYATQ6IB77 296 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 ZDHHC24Q6UX98 284 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 HID1Q8IV36 788 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 ZNF781Q8N8C0 355 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 PCYT2Q99447 389 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 CCDC28BQ9BUN5 200 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 STMN3Q9NZ72 180 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 PHLPP1O60346 1717 aa13.23□□□□□ -0.29
HDLBP-241ENST00000487169 BBIP1A8MTZ0 92 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 GNAZP19086 355 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 CDH3P22223 829 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 POLR2JP52435 117 aaKnown RBP13.22□□□□□ -0.29
HDLBP-241ENST00000487169 ECT2LQ008S8 904 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 SPIBQ01892 262 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 MAPK11Q15759 364 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 CEP78Q5JTW2 689 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 UBXN11Q5T124 520 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 SLC22A17Q8WUG5 538 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 CDKN2AIPNLQ96HQ2 116 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 C16orf70Q9BSU1 422 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 PALMDQ9NP74 551 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 RPL26L1Q9UNX3 145 aaKnown RBP13.22□□□□□ -0.29
HDLBP-241ENST00000487169 ARL5AQ9Y689 179 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 COLEC10Q9Y6Z7 277 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 CEP290O15078 2479 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 CCNYL3P0C7X3 344 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 ZNF37AP17032 561 aaPredicted RBP13.22□□□□□ -0.29
HDLBP-241ENST00000487169 CSNK2BP67870 215 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 RFTN2Q52LD8 501 aaPredicted RBP13.22□□□□□ -0.29
HDLBP-241ENST00000487169 MBLAC2Q68D91 279 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 TRAF7Q6Q0C0 670 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 PQLC1Q8N2U9 271 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 NAT8LQ8N9F0 302 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 SIDT2Q8NBJ9 832 aaKnown RBP13.22□□□□□ -0.29
HDLBP-241ENST00000487169 OR4A15Q8NGL6 344 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 IL12RB2Q99665 862 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 ZNF358Q9NW07 568 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 RHBDL2Q9NX52 303 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 MAGEL2Q9UJ55 1249 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 STYXL1Q9Y6J8 313 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 PARP4Q9UKK3 1724 aaKnown RBP13.22□□□□□ -0.29
HDLBP-241ENST00000487169 H3BNH8 94 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 ACVRL1P37023 503 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 CLK3P49761 638 aaKnown RBP13.22□□□□□ -0.29
HDLBP-241ENST00000487169 INCA1Q0VD86 236 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 PDGFRLQ15198 375 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 MINDY4Q4G0A6 757 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 PDZK1Q5T2W1 519 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 FAM13CQ8NE31 585 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 SLC38A2Q96QD8 506 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 HDHD2Q9H0R4 259 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 SEC14L3Q9UDX4 400 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 KNTC1P50748 2209 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 J3KR12 359 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 GABRDO14764 452 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 UROSP10746 265 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 ITGA1P56199 1179 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 RSBN1Q5VWQ0 802 aaPredicted RBP13.22□□□□□ -0.29
HDLBP-241ENST00000487169 SULT1C3Q6IMI6 304 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 MED27Q6P2C8 311 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 KBTBD2Q8IY47 623 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 EXOSC8Q96B26 276 aaKnown RBP13.22□□□□□ -0.29
HDLBP-241ENST00000487169 CLPTM1LQ96KA5 538 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 POLR1BQ9H9Y6 1135 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 CREBZFQ9NS37 354 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 SEMA3GQ9NS98 782 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 POLR3BQ9NW08 1133 aaPredicted RBP13.22□□□□□ -0.29
HDLBP-241ENST00000487169 GSTK1Q9Y2Q3 226 aa13.22□□□□□ -0.29
HDLBP-241ENST00000487169 PNMA8CA0A1B0GUJ8 204 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms