RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 RBL1P28749 1068 aa24.13■■□□□ 1.45
LIME1-206ENST00000487026 SPAM1P38567 509 aa24.13■■□□□ 1.45
LIME1-206ENST00000487026 SEPHS1P49903 392 aa24.13■■□□□ 1.45
LIME1-206ENST00000487026 GTF2H3Q13889 308 aa24.13■■□□□ 1.45
LIME1-206ENST00000487026 SPA17Q15506 151 aa24.13■■□□□ 1.45
LIME1-206ENST00000487026 C11orf63Q6NUN7 778 aa24.13■■□□□ 1.45
LIME1-206ENST00000487026 XKR5Q6UX68 686 aa24.13■■□□□ 1.45
LIME1-206ENST00000487026 PRICKLE2Q7Z3G6 844 aa24.13■■□□□ 1.45
LIME1-206ENST00000487026 GLT6D1Q7Z4J2 308 aa24.13■■□□□ 1.45
LIME1-206ENST00000487026 DAAM2Q86T65 1068 aa24.13■■□□□ 1.45
LIME1-206ENST00000487026 RBM41Q96IZ5 413 aaKnown RBP24.13■■□□□ 1.45
LIME1-206ENST00000487026 C9orf72Q96LT7 481 aa24.13■■□□□ 1.45
LIME1-206ENST00000487026 VAT1Q99536 393 aa24.13■■□□□ 1.45
LIME1-206ENST00000487026 RSPH14Q9UHP6 348 aa24.13■■□□□ 1.45
LIME1-206ENST00000487026 MN1Q10571 1320 aaPredicted RBP24.12■■□□□ 1.45
LIME1-206ENST00000487026 LOC101059948A0A1B0GTJ6 334 aa24.12■■□□□ 1.45
LIME1-206ENST00000487026 HACD1B0YJ81 288 aa24.12■■□□□ 1.45
LIME1-206ENST00000487026 H7C0C1 242 aa24.12■■□□□ 1.45
LIME1-206ENST00000487026 POLR1CO15160 346 aaPredicted RBP24.12■■□□□ 1.45
LIME1-206ENST00000487026 CAPN5O15484 640 aaPredicted RBP24.12■■□□□ 1.45
LIME1-206ENST00000487026 C9P02748 559 aa24.12■■□□□ 1.45
LIME1-206ENST00000487026 ATP5OP48047 213 aa24.12■■□□□ 1.45
LIME1-206ENST00000487026 LEPRP48357 1165 aaKnown RBP24.12■■□□□ 1.45
LIME1-206ENST00000487026 MPP3Q13368 585 aa24.12■■□□□ 1.45
LIME1-206ENST00000487026 PPP2R5EQ16537 467 aa24.12■■□□□ 1.45
LIME1-206ENST00000487026 BBS12Q6ZW61 710 aa24.12■■□□□ 1.45
LIME1-206ENST00000487026 CCDC170Q8IYT3 715 aa24.12■■□□□ 1.45
LIME1-206ENST00000487026 NLGN4XQ8N0W4 816 aa24.12■■□□□ 1.45
LIME1-206ENST00000487026 RASGEF1AQ8N9B8 481 aa24.12■■□□□ 1.45
LIME1-206ENST00000487026 NLGN4YQ8NFZ3 816 aaPredicted RBP24.12■■□□□ 1.45
LIME1-206ENST00000487026 CXorf40BQ96DE9 158 aa24.12■■□□□ 1.45
LIME1-206ENST00000487026 FAM117AQ9C073 453 aa24.12■■□□□ 1.45
LIME1-206ENST00000487026 SLC40A1Q9NP59 571 aa24.12■■□□□ 1.45
LIME1-206ENST00000487026 HACD3Q9P035 362 aa24.12■■□□□ 1.45
LIME1-206ENST00000487026 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.12■■□□□ 1.45
LIME1-206ENST00000487026 FLNBO75369 2602 aaKnown RBP24.12■■□□□ 1.45
LIME1-206ENST00000487026 GLYATL1P3A0A0U1RQE8 302 aa24.11■■□□□ 1.45
LIME1-206ENST00000487026 RCCD1A6NED2 376 aa24.11■■□□□ 1.45
LIME1-206ENST00000487026 KIF1CO43896 1103 aaKnown RBP24.11■■□□□ 1.45
LIME1-206ENST00000487026 POP7O75817 140 aaKnown RBP24.11■■□□□ 1.45
LIME1-206ENST00000487026 STK17BO94768 372 aa24.11■■□□□ 1.45
LIME1-206ENST00000487026 MAP4P27816 1152 aaKnown RBP24.11■■□□□ 1.45
LIME1-206ENST00000487026 CTSCP53634 463 aa24.11■■□□□ 1.45
LIME1-206ENST00000487026 FOXM1Q08050 763 aa24.11■■□□□ 1.45
LIME1-206ENST00000487026 GPR18Q14330 331 aa24.11■■□□□ 1.45
LIME1-206ENST00000487026 CCDC181Q5TID7 509 aa24.11■■□□□ 1.45
LIME1-206ENST00000487026 AGAP9Q5VTM2 703 aa24.11■■□□□ 1.45
LIME1-206ENST00000487026 WASH2PQ6VEQ5 465 aa24.11■■□□□ 1.45
LIME1-206ENST00000487026 BRSK1Q8TDC3 778 aa24.11■■□□□ 1.45
LIME1-206ENST00000487026 RSC1A1Q92681 617 aa24.11■■□□□ 1.45
LIME1-206ENST00000487026 GORASP1Q9BQQ3 440 aa24.11■■□□□ 1.45
LIME1-206ENST00000487026 ZPBPQ9BS86 351 aa24.11■■□□□ 1.45
LIME1-206ENST00000487026 WASH6PQ9NQA3 447 aa24.11■■□□□ 1.45
LIME1-206ENST00000487026 STARD5Q9NSY2 213 aa24.11■■□□□ 1.45
LIME1-206ENST00000487026 SIDT1Q9NXL6 827 aaKnown RBP24.11■■□□□ 1.45
LIME1-206ENST00000487026 TRHDEQ9UKU6 1024 aa24.11■■□□□ 1.45
LIME1-206ENST00000487026 APOC4-APOC2K7ER74 178 aa24.1■■□□□ 1.45
LIME1-206ENST00000487026 GAPDHSO14556 408 aaPredicted RBP24.1■■□□□ 1.45
LIME1-206ENST00000487026 NKX2-8O15522 239 aa24.1■■□□□ 1.45
LIME1-206ENST00000487026 APOC2P02655 101 aa24.1■■□□□ 1.45
LIME1-206ENST00000487026 ANKRD34CP0C6C1 535 aa24.1■■□□□ 1.45
LIME1-206ENST00000487026 VCLP18206 1134 aa24.1■■□□□ 1.45
LIME1-206ENST00000487026 HLA-DPA1P20036 260 aa24.1■■□□□ 1.45
LIME1-206ENST00000487026 CYLC1P35663 651 aaPredicted RBP24.1■■□□□ 1.45
LIME1-206ENST00000487026 SH3BP2P78314 561 aa24.1■■□□□ 1.45
LIME1-206ENST00000487026 OLIG2Q13516 323 aa24.1■■□□□ 1.45
LIME1-206ENST00000487026 GPRC6AQ5T6X5 926 aa24.1■■□□□ 1.45
LIME1-206ENST00000487026 ZDHHC20Q5W0Z9 365 aa24.1■■□□□ 1.45
LIME1-206ENST00000487026 TMEM220Q6QAJ8 160 aa24.1■■□□□ 1.45
LIME1-206ENST00000487026 FAM83HQ6ZRV2 1179 aaPredicted RBP24.1■■□□□ 1.45
LIME1-206ENST00000487026 AMZ2Q86W34 360 aa24.1■■□□□ 1.45
LIME1-206ENST00000487026 FAM118BQ9BPY3 351 aa24.1■■□□□ 1.45
LIME1-206ENST00000487026 FICDQ9BVA6 458 aa24.1■■□□□ 1.45
LIME1-206ENST00000487026 FSD1LQ9BXM9 530 aa24.1■■□□□ 1.45
LIME1-206ENST00000487026 GPN2Q9H9Y4 310 aaPredicted RBP24.1■■□□□ 1.45
LIME1-206ENST00000487026 POT1Q9NUX5 634 aa24.1■■□□□ 1.45
LIME1-206ENST00000487026 PSMD13Q9UNM6 376 aa24.1■■□□□ 1.45
LIME1-206ENST00000487026 PKP3Q9Y446 797 aa24.1■■□□□ 1.45
LIME1-206ENST00000487026 HEMK1Q9Y5R4 338 aaPredicted RBP24.1■■□□□ 1.45
LIME1-206ENST00000487026 DUSP10Q9Y6W6 482 aa24.1■■□□□ 1.45
LIME1-206ENST00000487026 BSNQ9UPA5 3926 aa24.1■■□□□ 1.45
LIME1-206ENST00000487026 TLN1Q9Y490 2541 aaKnown RBP24.1■■□□□ 1.45
LIME1-206ENST00000487026 SOWAHDA6NJG2 315 aa24.09■■□□□ 1.45
LIME1-206ENST00000487026 OR2AG2A6NM03 316 aa24.09■■□□□ 1.45
LIME1-206ENST00000487026 RASSF9O75901 435 aa24.09■■□□□ 1.45
LIME1-206ENST00000487026 XRCC4Q13426 336 aa24.09■■□□□ 1.45
LIME1-206ENST00000487026 LDLRAP1Q5SW96 308 aa24.09■■□□□ 1.45
LIME1-206ENST00000487026 BORAQ6PGQ7 559 aa24.09■■□□□ 1.45
LIME1-206ENST00000487026 DTX3LQ8TDB6 740 aa24.09■■□□□ 1.45
LIME1-206ENST00000487026 NAT14Q8WUY8 206 aa24.09■■□□□ 1.45
LIME1-206ENST00000487026 APOL2Q9BQE5 337 aa24.09■■□□□ 1.45
LIME1-206ENST00000487026 GBA3Q9H227 469 aa24.09■■□□□ 1.45
LIME1-206ENST00000487026 IL17BQ9UHF5 180 aa24.09■■□□□ 1.45
LIME1-206ENST00000487026 TMEM184BQ9Y519 407 aaPredicted RBP24.09■■□□□ 1.45
LIME1-206ENST00000487026 ARL5AQ9Y689 179 aa24.09■■□□□ 1.45
LIME1-206ENST00000487026 EPN1Q9Y6I3 576 aaPredicted RBP24.09■■□□□ 1.45
LIME1-206ENST00000487026 MACROD2A1Z1Q3 448 aa24.08■■□□□ 1.45
LIME1-206ENST00000487026 ZNF891A8MT65 544 aaPredicted RBP24.08■■□□□ 1.45
LIME1-206ENST00000487026 STX7O15400 261 aaKnown RBP24.08■■□□□ 1.45
LIME1-206ENST00000487026 OTUD4Q01804 1114 aaKnown RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms