RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 CSNK2A3Q8NEV1 391 aa5.97□□□□□ -1.45
RTN4-214ENST00000486085 APBB2Q92870 758 aa5.97□□□□□ -1.45
RTN4-214ENST00000486085 NSUN4Q96CB9 384 aaKnown RBP5.97□□□□□ -1.45
RTN4-214ENST00000486085 GRAMD2BQ96HH9 432 aa5.97□□□□□ -1.45
RTN4-214ENST00000486085 PGAM5Q96HS1 289 aa5.97□□□□□ -1.45
RTN4-214ENST00000486085 OR2A14Q96R47 310 aa5.97□□□□□ -1.45
RTN4-214ENST00000486085 WACQ9BTA9 647 aa5.97□□□□□ -1.45
RTN4-214ENST00000486085 PIGMQ9H3S5 423 aa5.97□□□□□ -1.45
RTN4-214ENST00000486085 WDR26Q9H7D7 661 aa5.97□□□□□ -1.45
RTN4-214ENST00000486085 LTB4R2Q9NPC1 389 aa5.97□□□□□ -1.45
RTN4-214ENST00000486085 COPG2Q9UBF2 871 aa5.97□□□□□ -1.45
RTN4-214ENST00000486085 OR14J1Q9UGF5 321 aa5.97□□□□□ -1.45
RTN4-214ENST00000486085 ZNF831Q5JPB2 1677 aa5.97□□□□□ -1.45
RTN4-214ENST00000486085 SOS1Q07889 1333 aaPredicted RBP5.97□□□□□ -1.45
RTN4-214ENST00000486085 PCDH11XQ9BZA7 1347 aa5.97□□□□□ -1.45
RTN4-214ENST00000486085 PCDH11YQ9BZA8 1340 aa5.97□□□□□ -1.45
RTN4-214ENST00000486085 MAP3K5Q99683 1374 aa5.96□□□□□ -1.45
RTN4-214ENST00000486085 SIPA1L3O60292 1781 aaPredicted RBP5.96□□□□□ -1.46
RTN4-214ENST00000486085 SCN11AQ9UI33 1791 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 SMAD6O43541 496 aaKnown RBP5.96□□□□□ -1.46
RTN4-214ENST00000486085 LDHCP07864 332 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 SRCP12931 536 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 RRM1P23921 792 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 TMPOP42166 694 aaKnown RBP5.96□□□□□ -1.46
RTN4-214ENST00000486085 THBS3P49746 956 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 PDLIM4P50479 330 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 FOXG1P55316 489 aaPredicted RBP5.96□□□□□ -1.46
RTN4-214ENST00000486085 TAS2R40P59535 323 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 NANOS2P60321 138 aaKnown RBP5.96□□□□□ -1.46
RTN4-214ENST00000486085 CALD1Q05682 793 aaKnown RBP5.96□□□□□ -1.46
RTN4-214ENST00000486085 CDC16Q13042 620 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 ATP13A5Q4VNC0 1218 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 SOWAHCQ53LP3 525 aaPredicted RBP5.96□□□□□ -1.46
RTN4-214ENST00000486085 PMS2CLQ68D20 193 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 RGMBQ6NW40 437 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 PDXDC1Q6P996 788 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 TOM1L2Q6ZVM7 507 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 BEST3Q8N1M1 668 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 HMGCLL1Q8TB92 370 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 WFIKKN2Q8TEU8 576 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 SCMH1Q96GD3 660 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 CALML4Q96GE6 196 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 C3orf30Q96M34 536 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 OR1F2PQ96R84 312 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 FIZ1Q96SL8 496 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 GAD1Q99259 594 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 MAK16Q9BXY0 300 aaKnown RBP5.96□□□□□ -1.46
RTN4-214ENST00000486085 CCDC68Q9H2F9 335 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 HIPK2Q9H2X6 1198 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 NSMCE4AQ9NXX6 385 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 OGFRQ9NZT2 677 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 NFS1Q9Y697 457 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 MAPK8IP3Q9UPT6 1336 aa5.96□□□□□ -1.46
RTN4-214ENST00000486085 DLG5Q8TDM6 1919 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 LACTBL1A8MY62 500 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 ERVV-2B6SEH9 535 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 K7ENM7 598 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 M0QZ24 198 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 SPINT2O43291 252 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 GPC4O75487 556 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 TSPAN9O75954 239 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 GAGE7O76087 117 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 TPPPO94811 219 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 CLDN14O95500 239 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 SRPRAP08240 638 aaKnown RBP5.95□□□□□ -1.46
RTN4-214ENST00000486085 ZNF853P0CG23 659 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 GAGE12FP0CL80 117 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 GAGE12GP0CL81 117 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 GAGE12IP0CL82 117 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 CSH1P0DML2 217 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 CSH2P0DML3 217 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 FCGR1AP12314 374 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 PORP16435 677 aaPredicted RBP5.95□□□□□ -1.46
RTN4-214ENST00000486085 ANXA7P20073 488 aaKnown RBP5.95□□□□□ -1.46
RTN4-214ENST00000486085 UBA1P22314 1058 aaKnown RBP5.95□□□□□ -1.46
RTN4-214ENST00000486085 GCH1P30793 250 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 ACTN2P35609 894 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 PEX5P50542 639 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 SNX16P57768 344 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 MRPS34P82930 218 aaKnown RBP5.95□□□□□ -1.46
RTN4-214ENST00000486085 FOXM1Q08050 763 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 GAGE1Q13065 139 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 GAGE4Q13068 117 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 AIMP2Q13155 320 aaKnown RBP5.95□□□□□ -1.46
RTN4-214ENST00000486085 NFATC4Q14934 902 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 PNLIPRP3Q17RR3 467 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 MTHFSDQ2M296 383 aaKnown RBP5.95□□□□□ -1.46
RTN4-214ENST00000486085 DCST1Q5T197 706 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 ZNF280DQ6N043 979 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 CFAP77Q6ZQR2 320 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 SDCCAG8Q86SQ7 713 aaPredicted RBP5.95□□□□□ -1.46
RTN4-214ENST00000486085 ZDHHC17Q8IUH5 632 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 SAMD14Q8IZD0 417 aaPredicted RBP5.95□□□□□ -1.46
RTN4-214ENST00000486085 PCDH20Q8N6Y1 951 aaKnown RBP5.95□□□□□ -1.46
RTN4-214ENST00000486085 ZNF114Q8NC26 417 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 OR2AK2Q8NG84 335 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 RHBDF1Q96CC6 855 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 RSRC1Q96IZ7 334 aaKnown RBP5.95□□□□□ -1.46
RTN4-214ENST00000486085 LYZL4Q96KX0 146 aa5.95□□□□□ -1.46
RTN4-214ENST00000486085 CMKLR1Q99788 373 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms