RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 NDUFS3O75489 264 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 USP1O94782 785 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 EPN2O95208 641 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 ACSL3O95573 720 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 SOD1P00441 154 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 WNT1P04628 370 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 ITGB6P18564 788 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 MSH3P20585 1137 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 HTR1BP28222 390 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 PMLP29590 882 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 PBLDP30039 288 aaPredicted RBP5.57□□□□□ -1.52
COPS3-208ENST00000486032 ECHS1P30084 290 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 NUDT1P36639 197 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 MPLP40238 635 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 MAGEA3P43357 314 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 ABCG1P45844 678 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 RABIFP47224 123 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 POLD2P49005 469 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 DCDC1P59894 354 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 RACK1P63244 317 aaKnown RBP5.57□□□□□ -1.52
COPS3-208ENST00000486032 TUBB4BP68371 445 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 XIAPP98170 497 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 MPP1Q00013 466 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 CDK3Q00526 305 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 IL9RQ01113 521 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 CACNG1Q06432 222 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 SPEM2Q0P670 501 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 CTBP1Q13363 440 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 ITGA9Q13797 1035 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 GTF2H3Q13889 308 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 SEMA3AQ14563 771 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 CRYMQ14894 314 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 UAP1Q16222 522 aaPredicted RBP5.57□□□□□ -1.52
COPS3-208ENST00000486032 KYNUQ16719 465 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 LONRF1Q17RB8 773 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 DUOXA1Q1HG43 343 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 HSP90AA5PQ58FG0 334 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 TRIM61Q5EBN2 209 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 SPANXN3Q5MJ09 141 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 TPRG1LQ5T0D9 272 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 HENMT1Q5T8I9 393 aaKnown RBP5.57□□□□□ -1.52
COPS3-208ENST00000486032 ZDHHC20Q5W0Z9 365 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 ZNF470Q6ECI4 717 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 TRMT10BQ6PF06 316 aaKnown RBP5.57□□□□□ -1.52
COPS3-208ENST00000486032 CRTC3Q6UUV7 619 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 KYAT3Q6YP21 454 aaKnown RBP5.57□□□□□ -1.52
COPS3-208ENST00000486032 CCNI2Q6ZMN8 369 aaPredicted RBP5.57□□□□□ -1.52
COPS3-208ENST00000486032 UNC5AQ6ZN44 842 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 C3orf62Q6ZUJ4 267 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 SNX20Q7Z614 316 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 KCNMB4Q86W47 210 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 SERPINA9Q86WD7 417 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 PHYKPLQ8IUZ5 450 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 SYT12Q8IV01 421 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 HID1Q8IV36 788 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 CTAGE3PQ8IX95 158 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 DMRTC2Q8IXT2 367 aaPredicted RBP5.57□□□□□ -1.52
COPS3-208ENST00000486032 CBARPQ8N350 705 aaPredicted RBP5.57□□□□□ -1.52
COPS3-208ENST00000486032 DENND6BQ8NEG7 585 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 OR2I1PQ8NGU4 316 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 OR4L1Q8NH43 312 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 BTN2A2Q8WVV5 523 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 UBLCP1Q8WVY7 318 aaPredicted RBP5.57□□□□□ -1.52
COPS3-208ENST00000486032 ASB12Q8WXK4 309 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 DNASE2BQ8WZ79 361 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 SEC14L1Q92503 715 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 GLYATL1Q969I3 302 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 TSACCQ96A04 125 aaPredicted RBP5.57□□□□□ -1.52
COPS3-208ENST00000486032 FUBP1Q96AE4 644 aaKnown RBP5.57□□□□□ -1.52
COPS3-208ENST00000486032 SKA1Q96BD8 255 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 CENPTQ96BT3 561 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 ZBTB9Q96C00 473 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 LRRC39Q96DD0 335 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 CCDC97Q96F63 343 aaPredicted RBP5.57□□□□□ -1.52
COPS3-208ENST00000486032 DCUN1D1Q96GG9 259 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 HIC2Q96JB3 615 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 ZC3H10Q96K80 434 aaKnown RBP5.57□□□□□ -1.52
COPS3-208ENST00000486032 PLEKHG4BQ96PX9 1271 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 ORAI3Q9BRQ5 295 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 NAT9Q9BTE0 207 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 ZSCAN5AQ9BUG6 496 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 BOCQ9BWV1 1114 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 FOXP3Q9BZS1 431 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 IRF2BPLQ9H1B7 796 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 OR2AG1Q9H205 316 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 CDC42EP4Q9H3Q1 356 aaKnown RBP5.57□□□□□ -1.52
COPS3-208ENST00000486032 MRM3Q9HC36 420 aaKnown RBP5.57□□□□□ -1.52
COPS3-208ENST00000486032 CYP4F12Q9HCS2 524 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 MRPL40Q9NQ50 206 aaKnown RBP5.57□□□□□ -1.52
COPS3-208ENST00000486032 FBXO6Q9NRD1 293 aaPredicted RBP5.57□□□□□ -1.52
COPS3-208ENST00000486032 TREX1Q9NSU2 369 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 CATSPERZQ9NTU4 200 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 KCTD5Q9NXV2 234 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 NINJ2Q9NZG7 142 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 MARCH4Q9P2E8 410 aaPredicted RBP5.57□□□□□ -1.52
COPS3-208ENST00000486032 FAM8A1Q9UBU6 413 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 SUSD2Q9UGT4 822 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 ZNHIT2Q9UHR6 403 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 PRKAB1Q9Y478 270 aa5.57□□□□□ -1.52
COPS3-208ENST00000486032 HS3ST3A1Q9Y663 406 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms