RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 NDNQ99608 321 aa17.33■□□□□ 0.36
CHMP3-207ENST00000485465 TMEM109Q9BVC6 243 aa17.33■□□□□ 0.36
CHMP3-207ENST00000485465 ROPN1BQ9BZX4 212 aaPredicted RBP17.33■□□□□ 0.36
CHMP3-207ENST00000485465 KCNH6Q9H252 994 aa17.33■□□□□ 0.36
CHMP3-207ENST00000485465 CCDC68Q9H2F9 335 aa17.33■□□□□ 0.36
CHMP3-207ENST00000485465 ROPN1Q9HAT0 212 aaPredicted RBP17.33■□□□□ 0.36
CHMP3-207ENST00000485465 MRPL40Q9NQ50 206 aaKnown RBP17.33■□□□□ 0.36
CHMP3-207ENST00000485465 PSMC3IPQ9P2W1 217 aaPredicted RBP17.33■□□□□ 0.36
CHMP3-207ENST00000485465 MOSPD1Q9UJG1 213 aa17.33■□□□□ 0.36
CHMP3-207ENST00000485465 SUFUQ9UMX1 484 aa17.33■□□□□ 0.36
CHMP3-207ENST00000485465 SMG5Q9UPR3 1016 aaKnown RBP17.33■□□□□ 0.36
CHMP3-207ENST00000485465 ANKRD6Q9Y2G4 727 aa17.33■□□□□ 0.36
CHMP3-207ENST00000485465 MTO1Q9Y2Z2 717 aaKnown RBP17.33■□□□□ 0.36
CHMP3-207ENST00000485465 PCYT1BQ9Y5K3 369 aaPredicted RBP17.33■□□□□ 0.36
CHMP3-207ENST00000485465 FANCMQ8IYD8 2048 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 A0A1B0GVT2 93 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 RASGRF2O14827 1237 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 ITGA2BP08514 1039 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 SLCO1A2P46721 670 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 PRLHRP49683 370 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 DUOXA1Q1HG43 343 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 ALG11Q2TAA5 492 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 RBM20Q5T481 1227 aaKnown RBP17.32■□□□□ 0.36
CHMP3-207ENST00000485465 HECTD2Q5U5R9 776 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 CRTC3Q6UUV7 619 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 LRRTM4Q86VH4 590 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 PARGQ86W56 976 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 TRAPPC5Q8IUR0 188 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 ZNF547Q8IVP9 402 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 GPATCH11Q8N954 259 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 ATOH1Q92858 354 aaPredicted RBP17.32■□□□□ 0.36
CHMP3-207ENST00000485465 PDXPQ96GD0 296 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 ELMO2Q96JJ3 720 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 GPR22Q99680 433 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 CYP4F12Q9HCS2 524 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 ZNHIT2Q9UHR6 403 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 PNMA8BQ9ULN7 279 aaPredicted RBP17.32■□□□□ 0.36
CHMP3-207ENST00000485465 PRKAB1Q9Y478 270 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 PCDHGA5Q9Y5G8 931 aa17.32■□□□□ 0.36
CHMP3-207ENST00000485465 FAM95CA0A1B0GW59 222 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 HMX2A2RU54 273 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 SMIM23A6NLE4 172 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 IQCF5A8MTL0 148 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 KMOO15229 486 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 KRT38O76015 456 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 TNFP01375 233 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 FTH1P02794 183 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 CNTFP26441 200 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 GNPDA1P46926 289 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 BNC1Q01954 994 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 PPARDQ03181 441 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 ZNF844Q08AG5 666 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 RASA2Q15283 850 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 PYCR3Q53H96 274 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 LGSNQ5TDP6 509 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 LAIR1Q6GTX8 287 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 FAM45BPQ6NSW5 357 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 TAOK1Q7L7X3 1001 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 GALNT13Q8IUC8 556 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 HID1Q8IV36 788 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 KRT222Q8N1A0 295 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 BEND7Q8N7W2 519 aaPredicted RBP17.31■□□□□ 0.36
CHMP3-207ENST00000485465 ACVR1CQ8NER5 493 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 FAM45AQ8TCE6 357 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 LINC00615Q96LM1 132 aaPredicted RBP17.31■□□□□ 0.36
CHMP3-207ENST00000485465 CCM2Q9BSQ5 444 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 TSSK1BQ9BXA7 367 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 CARS2Q9HA77 564 aaKnown RBP17.31■□□□□ 0.36
CHMP3-207ENST00000485465 VWA7Q9Y334 891 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 GPSM3Q9Y4H4 160 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 DNMT3AQ9Y6K1 912 aaPredicted RBP17.31■□□□□ 0.36
CHMP3-207ENST00000485465 DGKBQ9Y6T7 804 aa17.31■□□□□ 0.36
CHMP3-207ENST00000485465 TLDC2A0PJX2 215 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 DYNC1I1O14576 645 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 CDH16O75309 829 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 NIPSNAP2O75323 286 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 POP7O75817 140 aaKnown RBP17.3■□□□□ 0.36
CHMP3-207ENST00000485465 RASGRP1O95267 797 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 TRIM16O95361 564 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 ITGB6P18564 788 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 CHRM3P20309 590 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 CTSKP43235 329 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 CDKN2DP55273 166 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 POU4F1Q01851 419 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 BMPR2Q13873 1038 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 KIF19Q2TAC6 998 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 MROH9Q5TGP6 573 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 RD3Q7Z3Z2 195 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 C11orf96Q7Z7L8 435 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 DCLK2Q8N568 766 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 SUMF1Q8NBK3 374 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 LKAAEAR1Q8TD35 194 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 KCNJ9Q92806 393 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 PANX3Q96QZ0 392 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 OR2M4Q96R27 311 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 ARRDC1-AS1Q9H2J1 176 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 ERVMER34-1Q9H9K5 563 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 TM7SF3Q9NS93 570 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 EURLQ9NYK6 297 aa17.3■□□□□ 0.36
CHMP3-207ENST00000485465 CTNNAL1Q9UBT7 734 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms