RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 SIL1Q9H173 461 aa2.96□□□□□ -1.94
VPS50-216ENST00000484954 SEMA6AQ9H2E6 1030 aa2.96□□□□□ -1.94
VPS50-216ENST00000484954 APOBEC3GQ9HC16 384 aaKnown RBP2.96□□□□□ -1.94
VPS50-216ENST00000484954 EPB41L5Q9HCM4 733 aa2.96□□□□□ -1.94
VPS50-216ENST00000484954 SLC38A7Q9NVC3 462 aa2.96□□□□□ -1.94
VPS50-216ENST00000484954 ADPRHL2Q9NX46 363 aa2.96□□□□□ -1.94
VPS50-216ENST00000484954 FBXW11Q9UKB1 542 aa2.96□□□□□ -1.94
VPS50-216ENST00000484954 TMEM184BQ9Y519 407 aaPredicted RBP2.96□□□□□ -1.94
VPS50-216ENST00000484954 PIAS3Q9Y6X2 628 aa2.96□□□□□ -1.94
VPS50-216ENST00000484954 TP53BP1Q12888 1972 aaPredicted RBP2.95□□□□□ -1.94
VPS50-216ENST00000484954 A0A1B0GVY2 172 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 A6NL46 340 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 KRTAP16-1A8MUX0 517 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 ANKRD66B4E2M5 251 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 PLK4O00444 970 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 PLOD2O00469 737 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 MAP2K7O14733 419 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 HCRTR2O43614 444 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 CRLF1O75462 422 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 CLEC3BP05452 202 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 IGHV4-38-2P0DP08 117 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 ZNF26P17031 533 aaPredicted RBP2.95□□□□□ -1.94
VPS50-216ENST00000484954 ACADLP28330 430 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 NR2C2P49116 596 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 GALCP54803 685 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 TMEM187Q14656 261 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 PACS1Q6VY07 963 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 TSPAN33Q86UF1 283 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 CCDC190Q86UF4 302 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 CEP97Q8IW35 865 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 GCSAMQ8N6F7 178 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 PAF1Q8N7H5 531 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 FRMD1Q8N878 549 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 IL17REQ8NFR9 667 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 ETNPPLQ8TBG4 499 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 MORC4Q8TE76 937 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 SEPT5Q99719 369 aaPredicted RBP2.95□□□□□ -1.94
VPS50-216ENST00000484954 SIX2Q9NPC8 291 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 SETD4Q9NVD3 440 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 UBA2Q9UBT2 640 aaPredicted RBP2.95□□□□□ -1.94
VPS50-216ENST00000484954 LIMA1Q9UHB6 759 aaKnown RBP2.95□□□□□ -1.94
VPS50-216ENST00000484954 TSPYL4Q9UJ04 414 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 PYGO1Q9Y3Y4 419 aa2.95□□□□□ -1.94
VPS50-216ENST00000484954 OR2M5A3KFT3 312 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 MAGEB17A8MXT2 336 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 H0YIN7 160 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 TMEM189-UBE2V1I3L0A0 370 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 J3QR06 171 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 RTN3O95197 1032 aaPredicted RBP2.94□□□□□ -1.94
VPS50-216ENST00000484954 BMP10O95393 424 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 GNAZP19086 355 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 CBLP22681 906 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 BSGP35613 385 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 CLK1P49759 484 aaKnown RBP2.94□□□□□ -1.94
VPS50-216ENST00000484954 CTSCP53634 463 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 ZBED6P86452 979 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 PRKAA1Q13131 559 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 UBE2V1Q13404 147 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 NAB2Q15742 525 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 ADIPOQQ15848 244 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 LPAL2Q16609 132 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 DUOXA1Q1HG43 343 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 NDUFAF5Q5TEU4 345 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 ZNF790Q6PG37 636 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 MFSD6Q6ZSS7 791 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 PTOV1Q86YD1 416 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 ARHGAP12Q8IWW6 846 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 RNF168Q8IYW5 571 aaPredicted RBP2.94□□□□□ -1.94
VPS50-216ENST00000484954 WDR20Q8TBZ3 569 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 SEMA4DQ92854 862 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 ELMOD3Q96FG2 381 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 ART5Q96L15 291 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 C1orf74Q96LT6 269 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 TBATAQ96M53 351 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 RAD21L1Q9H4I0 556 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 JMJD4Q9H9V9 463 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 ZBTB20Q9HC78 741 aaPredicted RBP2.94□□□□□ -1.94
VPS50-216ENST00000484954 RCC2Q9P258 522 aaKnown RBP2.94□□□□□ -1.94
VPS50-216ENST00000484954 TMEM181Q9P2C4 612 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 CACNG5Q9UF02 275 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 DISP3Q9P2K9 1392 aa2.94□□□□□ -1.94
VPS50-216ENST00000484954 A0A0G2JLW4 131 aa2.93□□□□□ -1.94
VPS50-216ENST00000484954 SMAD9O15198 467 aaKnown RBP2.93□□□□□ -1.94
VPS50-216ENST00000484954 CAVIN2O95810 425 aa2.93□□□□□ -1.94
VPS50-216ENST00000484954 NGFP01138 241 aa2.93□□□□□ -1.94
VPS50-216ENST00000484954 IGLV1-44P01699 117 aa2.93□□□□□ -1.94
VPS50-216ENST00000484954 EIF2S1P05198 315 aaKnown RBP2.93□□□□□ -1.94
VPS50-216ENST00000484954 CEACAM1P13688 526 aa2.93□□□□□ -1.94
VPS50-216ENST00000484954 ANXA7P20073 488 aaKnown RBP2.93□□□□□ -1.94
VPS50-216ENST00000484954 THOP1P52888 689 aa2.93□□□□□ -1.94
VPS50-216ENST00000484954 NIPAL4Q0D2K0 466 aa2.93□□□□□ -1.94
VPS50-216ENST00000484954 G3BP1Q13283 466 aaKnown RBP eCLIP2.93□□□□□ -1.94
VPS50-216ENST00000484954 KIAA1644Q3SXP7 199 aa2.93□□□□□ -1.94
VPS50-216ENST00000484954 FFAR4Q5NUL3 377 aa2.93□□□□□ -1.94
VPS50-216ENST00000484954 GLDNQ6ZMI3 551 aaPredicted RBP2.93□□□□□ -1.94
VPS50-216ENST00000484954 ZNF534Q76KX8 674 aa2.93□□□□□ -1.94
VPS50-216ENST00000484954 CPLX4Q7Z7G2 160 aa2.93□□□□□ -1.94
VPS50-216ENST00000484954 CRYBG2Q8N1P7 616 aa2.93□□□□□ -1.94
VPS50-216ENST00000484954 DBF4BQ8NFT6 615 aa2.93□□□□□ -1.94
VPS50-216ENST00000484954 RDM1Q8NG50 284 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms