RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 GATA6Q92908 595 aa11.55□□□□□ -0.56
CDK5RAP2-217ENST00000484546 SLCO2A1Q92959 643 aa11.55□□□□□ -0.56
CDK5RAP2-217ENST00000484546 SH3KBP1Q96B97 665 aa11.55□□□□□ -0.56
CDK5RAP2-217ENST00000484546 SGF29Q96ES7 293 aa11.55□□□□□ -0.56
CDK5RAP2-217ENST00000484546 AHCYL2Q96HN2 611 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP2-217ENST00000484546 CNTNAP3BQ96NU0 1288 aa11.55□□□□□ -0.56
CDK5RAP2-217ENST00000484546 KRT12Q99456 494 aa11.55□□□□□ -0.56
CDK5RAP2-217ENST00000484546 SLC38A3Q99624 504 aa11.55□□□□□ -0.56
CDK5RAP2-217ENST00000484546 CNTNAP3Q9BZ76 1288 aa11.55□□□□□ -0.56
CDK5RAP2-217ENST00000484546 CHRAC1Q9NRG0 131 aa11.55□□□□□ -0.56
CDK5RAP2-217ENST00000484546 CATSPERZQ9NTU4 200 aa11.55□□□□□ -0.56
CDK5RAP2-217ENST00000484546 SYBUQ9NX95 663 aa11.55□□□□□ -0.56
CDK5RAP2-217ENST00000484546 TBC1D29Q9UFV1 150 aa11.55□□□□□ -0.56
CDK5RAP2-217ENST00000484546 SLC2A6Q9UGQ3 507 aa11.55□□□□□ -0.56
CDK5RAP2-217ENST00000484546 PCYT1BQ9Y5K3 369 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP2-217ENST00000484546 MAD1L1Q9Y6D9 718 aa11.55□□□□□ -0.56
CDK5RAP2-217ENST00000484546 DNMT3AQ9Y6K1 912 aaPredicted RBP11.55□□□□□ -0.56
CDK5RAP2-217ENST00000484546 RNF215Q9Y6U7 377 aa11.55□□□□□ -0.56
CDK5RAP2-217ENST00000484546 MYLKQ15746 1914 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 CHD8Q9HCK8 2581 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 FAM149AA5PLN7 773 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 OR51F1A6NGY5 319 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 SDR42E2A6NKP2 422 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 DNALI1O14645 258 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 TCEA3O75764 348 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 POP7O75817 140 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 URI1O94763 535 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 TMEM63AO94886 807 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 MT-CO3P00414 261 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 VIPP01282 170 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 TUBB4AP04350 444 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 RPLP0P05388 317 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 PNLIPP16233 465 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 ALDH4A1P30038 563 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 NSG1P42857 185 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 MAGEA6P43360 314 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 ARSDP51689 593 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 CLCNKAP51800 687 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 CTSCP53634 463 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 HHEXQ03014 270 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 ITIH4Q14624 930 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 MAP9Q49MG5 647 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 DNAJC21Q5F1R6 531 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 ANKRD22Q5VYY1 191 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 ARMC3Q5W041 872 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 UNQ6494/PRO21346Q6UXR6 183 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 CERS6Q6ZMG9 384 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 CCNI2Q6ZMN8 369 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 RBM44Q6ZP01 1051 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 MAATS1Q7Z4T9 603 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 JAMLQ86YT9 394 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 NAGSQ8N159 534 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 MCUQ8NE86 351 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 OR13J1Q8NGT2 312 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 SLC37A2Q8TED4 501 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 PATE1Q8WXA2 126 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 CXorf40BQ96DE9 158 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 SERPINB12Q96P63 405 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 GFM1Q96RP9 751 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 TSSK1BQ9BXA7 367 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 TRIM31Q9BZY9 425 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 MRM3Q9HC36 420 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 PRDM8Q9NQV8 689 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 SOX13Q9UN79 622 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 NEU2Q9Y3R4 380 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 ST14Q9Y5Y6 855 aa11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 COL27A1Q8IZC6 1860 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP2-217ENST00000484546 ACACBO00763 2458 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 MAGEB16A2A368 324 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 AGAP14A8MT82 685 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 EFCAB8A8MWE9 144 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 C1QTNF9BB2RNN3 333 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 SMAPO00193 183 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 TTI1O43156 1089 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 AVILO75366 819 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 SLC35G4P0C7Q5 338 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 OR56A5P0C7T3 313 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 C1QTNF9P0C862 333 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 PRSS56P0CW18 603 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 RPL10P27635 214 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 NMBRP28336 390 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 FOXN2P32314 431 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 TTPAP49638 278 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 PRLHRP49683 370 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 CDKN1CP49918 316 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 DRG2P55039 364 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 C2orf54Q08AI8 447 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 TARDBPQ13148 414 aaKnown RBP eCLIP11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 KRT33BQ14525 404 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 DBN1Q16643 649 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 AMZ1Q400G9 498 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 BCL7AQ4VC05 210 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 SYTL3Q4VX76 610 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 RNASEH2BQ5TBB1 312 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 MRNIPQ6NTE8 343 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 IYDQ6PHW0 289 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 ZNF534Q76KX8 674 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 SDCCAG8Q86SQ7 713 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 HOOK3Q86VS8 718 aa11.53□□□□□ -0.56
CDK5RAP2-217ENST00000484546 ZNF547Q8IVP9 402 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms