RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 JAMLQ86YT9 394 aa15.64■□□□□ 0.09
UPF3A-208ENST00000484246 SFTPA2Q8IWL1 248 aa15.64■□□□□ 0.09
UPF3A-208ENST00000484246 ARL14Q8N4G2 192 aa15.64■□□□□ 0.09
UPF3A-208ENST00000484246 MAPK15Q8TD08 544 aa15.64■□□□□ 0.09
UPF3A-208ENST00000484246 HDAC10Q969S8 669 aa15.64■□□□□ 0.09
UPF3A-208ENST00000484246 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.64■□□□□ 0.09
UPF3A-208ENST00000484246 CCDC74AQ96AQ1 378 aa15.64■□□□□ 0.09
UPF3A-208ENST00000484246 DCUN1D1Q96GG9 259 aa15.64■□□□□ 0.09
UPF3A-208ENST00000484246 CNTNAP3BQ96NU0 1288 aa15.64■□□□□ 0.09
UPF3A-208ENST00000484246 CCDC3Q9BQI4 270 aa15.64■□□□□ 0.09
UPF3A-208ENST00000484246 CNTNAP3Q9BZ76 1288 aa15.64■□□□□ 0.09
UPF3A-208ENST00000484246 SYBUQ9NX95 663 aa15.64■□□□□ 0.09
UPF3A-208ENST00000484246 ASIC3Q9UHC3 531 aa15.64■□□□□ 0.09
UPF3A-208ENST00000484246 KLK13Q9UKR3 277 aa15.64■□□□□ 0.09
UPF3A-208ENST00000484246 RNF215Q9Y6U7 377 aa15.64■□□□□ 0.09
UPF3A-208ENST00000484246 CACNA1BQ00975 2339 aa15.63■□□□□ 0.09
UPF3A-208ENST00000484246 AP2A2O94973 939 aa15.63■□□□□ 0.09
UPF3A-208ENST00000484246 EML2O95834 649 aa15.63■□□□□ 0.09
UPF3A-208ENST00000484246 ATP1B2P14415 290 aaPredicted RBP15.63■□□□□ 0.09
UPF3A-208ENST00000484246 GPR3P46089 330 aa15.63■□□□□ 0.09
UPF3A-208ENST00000484246 MAZP56270 477 aaKnown RBP15.63■□□□□ 0.09
UPF3A-208ENST00000484246 PRAMEP78395 509 aa15.63■□□□□ 0.09
UPF3A-208ENST00000484246 KCTD19Q17RG1 926 aaPredicted RBP15.63■□□□□ 0.09
UPF3A-208ENST00000484246 CCDC157Q569K6 752 aa15.63■□□□□ 0.09
UPF3A-208ENST00000484246 ZRANB3Q5FWF4 1079 aa15.63■□□□□ 0.09
UPF3A-208ENST00000484246 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.63■□□□□ 0.09
UPF3A-208ENST00000484246 ABRAXAS1Q6UWZ7 409 aa15.63■□□□□ 0.09
UPF3A-208ENST00000484246 SPRED1Q7Z699 444 aa15.63■□□□□ 0.09
UPF3A-208ENST00000484246 AMZ2Q86W34 360 aa15.63■□□□□ 0.09
UPF3A-208ENST00000484246 KLHL7Q8IXQ5 586 aa15.63■□□□□ 0.09
UPF3A-208ENST00000484246 MPP5Q8N3R9 675 aa15.63■□□□□ 0.09
UPF3A-208ENST00000484246 SPATA4Q8NEY3 305 aa15.63■□□□□ 0.09
UPF3A-208ENST00000484246 SLC37A2Q8TED4 501 aa15.63■□□□□ 0.09
UPF3A-208ENST00000484246 GRAMD1AQ96CP6 724 aa15.63■□□□□ 0.09
UPF3A-208ENST00000484246 C16orf45Q96MC5 204 aaPredicted RBP15.63■□□□□ 0.09
UPF3A-208ENST00000484246 TMEM121BQ9BXQ6 578 aaPredicted RBP15.63■□□□□ 0.09
UPF3A-208ENST00000484246 SARS2Q9NP81 518 aaKnown RBP15.63■□□□□ 0.09
UPF3A-208ENST00000484246 CHRAC1Q9NRG0 131 aa15.63■□□□□ 0.09
UPF3A-208ENST00000484246 KLC4Q9NSK0 619 aa15.63■□□□□ 0.09
UPF3A-208ENST00000484246 RABGEF1Q9UJ41 708 aa15.63■□□□□ 0.09
UPF3A-208ENST00000484246 EPG5Q9HCE0 2579 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 FAM237BA0A1B0GVD1 139 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 MAGEB16A2A368 324 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 CCDC78A2IDD5 438 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 MGAT4DA6NG13 374 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 OR51F1A6NGY5 319 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 KIF2AO00139 706 aaPredicted RBP15.62■□□□□ 0.09
UPF3A-208ENST00000484246 QSOX1O00391 747 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 POP7O75817 140 aaKnown RBP15.62■□□□□ 0.09
UPF3A-208ENST00000484246 GOT2P00505 430 aaKnown RBP15.62■□□□□ 0.09
UPF3A-208ENST00000484246 ARNTP27540 789 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 NSG1P42857 185 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 CDKN1CP49918 316 aaPredicted RBP15.62■□□□□ 0.09
UPF3A-208ENST00000484246 UBE2IP63279 158 aaKnown RBP15.62■□□□□ 0.09
UPF3A-208ENST00000484246 CRADDP78560 199 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 MORF4L2Q15014 288 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 ZNF658BQ4V348 819 aaPredicted RBP15.62■□□□□ 0.09
UPF3A-208ENST00000484246 AARS2Q5JTZ9 985 aaKnown RBP15.62■□□□□ 0.09
UPF3A-208ENST00000484246 KIAA0930Q6ICG6 404 aaPredicted RBP15.62■□□□□ 0.09
UPF3A-208ENST00000484246 TMEM220Q6QAJ8 160 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 XKR5Q6UX68 686 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 CCNJLQ8IV13 435 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 OR2L2Q8NH16 312 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 OR4L1Q8NH43 312 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 PATE1Q8WXA2 126 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 GATA6Q92908 595 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 CCDC97Q96F63 343 aaPredicted RBP15.62■□□□□ 0.09
UPF3A-208ENST00000484246 FAM96AQ9H5X1 160 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 UCK1Q9HA47 277 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 LRIT1Q9P2V4 623 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 CLCA2Q9UQC9 943 aa15.62■□□□□ 0.09
UPF3A-208ENST00000484246 C17orf113A0A1B0GUU1 675 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 SDR42E2A6NKP2 422 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 OR2AG2A6NM03 316 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 NDC80O14777 642 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 TTI1O43156 1089 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 MT-CO3P00414 261 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 PRSS56P0CW18 603 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 IDSP22304 550 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 NMBRP28336 390 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 CBLBQ13191 982 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 SQSTM1Q13501 440 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 CAMK2BQ13554 666 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 PLA2G4EQ3MJ16 856 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 FNBP1LQ5T0N5 605 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 METRNLQ641Q3 311 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 TMEM135Q86UB9 458 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 HM13Q8TCT9 377 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 MFSD3Q96ES6 412 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 SGF29Q96ES7 293 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 DEPDC7Q96QD5 511 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 TTC1Q99614 292 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 OSGEPL1Q9H4B0 414 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 VPS37BQ9H9H4 285 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 PRDM8Q9NQV8 689 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 CDC23Q9UJX2 597 aa15.61■□□□□ 0.09
UPF3A-208ENST00000484246 A0A1W2PQM1 296 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 FAM187AA6NFU0 413 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 RHPN2P1A8MT19 583 aa15.6■□□□□ 0.09
UPF3A-208ENST00000484246 D6RAR5 112 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms