RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 DEPDC1Q5TB30 811 aa19.55■□□□□ 0.72
RPUSD3-216ENST00000484134 TIGD7Q6NT04 549 aaPredicted RBP19.55■□□□□ 0.72
RPUSD3-216ENST00000484134 SCML4Q8N228 414 aa19.55■□□□□ 0.72
RPUSD3-216ENST00000484134 DCBLD1Q8N8Z6 715 aa19.55■□□□□ 0.72
RPUSD3-216ENST00000484134 ESAMQ96AP7 390 aa19.55■□□□□ 0.72
RPUSD3-216ENST00000484134 NODALQ96S42 347 aa19.55■□□□□ 0.72
RPUSD3-216ENST00000484134 KLHL25Q9H0H3 589 aa19.55■□□□□ 0.72
RPUSD3-216ENST00000484134 TFB2MQ9H5Q4 396 aaKnown RBP19.55■□□□□ 0.72
RPUSD3-216ENST00000484134 CATSPERBQ9H7T0 1116 aa19.55■□□□□ 0.72
RPUSD3-216ENST00000484134 DNAH12Q6ZR08 3092 aa19.55■□□□□ 0.72
RPUSD3-216ENST00000484134 FAM234BA2RU67 622 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 SLC1A7O00341 560 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 GJB3O75712 270 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 SOAT2O75908 522 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 GOT2P00505 430 aaKnown RBP19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 HPRP00739 348 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 ANXA6P08133 673 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 GJA8P48165 433 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 SUOXP51687 545 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 GABARAPL2P60520 117 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 CHRNB3Q05901 458 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 SELENBP1Q13228 472 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 FAM98BQ52LJ0 330 aaKnown RBP19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 SETMARQ53H47 684 aaPredicted RBP19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 ABI1Q8IZP0 508 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 FBXO39Q8N4B4 442 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 PJA1Q8NG27 643 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 SDCCAG3Q96C92 435 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 FEM1AQ9BSK4 669 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 CCDC90BQ9GZT6 254 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 TSPYL2Q9H2G4 693 aaPredicted RBP19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 SCHIP1Q9P0W5 487 aaPredicted RBP19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 FBXO10Q9UK96 956 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 POU2F3Q9UKI9 436 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 NUDT5Q9UKK9 219 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 NAALAD2Q9Y3Q0 740 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 NEUROG3Q9Y4Z2 214 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 FAM92AA1XBS5 289 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 NCF1BA6NI72 391 aaPredicted RBP19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 A8MU76 341 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 NCF1CA8MVU1 366 aaPredicted RBP19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 FGF10O15520 208 aaPredicted RBP19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 IRAK2O43187 625 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 XPNPEP2O43895 674 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 SNX2O60749 519 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 ECI2O75521 394 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 NCF1P14598 390 aaPredicted RBP19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 PRKACGP22612 351 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 RCVRNP35243 200 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 EMX1Q04741 257 aaPredicted RBP19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 C6orf136Q5SQH8 315 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 ANKS6Q68DC2 871 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 FRS2Q8WU20 508 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 FAR1Q8WVX9 515 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 EMID1Q96A84 441 aaPredicted RBP19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 MAGEE1Q9HCI5 957 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 ARL5AQ9Y689 179 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 TTC3P53804 2025 aa19.54■□□□□ 0.72
RPUSD3-216ENST00000484134 CCDC162PA2VCL2 907 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 FZD9O00144 591 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 CD3EAPO15446 510 aaKnown RBP19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 TBC1D4O60343 1298 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 MYO1DO94832 1006 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 MOCS2O96007 188 aaPredicted RBP19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 GGT1P19440 569 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 TSNQ15631 228 aaKnown RBP19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 MAPRE1Q15691 268 aaKnown RBP19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 TMEM236Q5W0B7 351 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 PAQR3Q6TCH7 311 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 TMEM179BQ7Z7N9 219 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 ZFAND4Q86XD8 727 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 C3orf58Q8NDZ4 430 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 FBXO30Q8TB52 745 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 SMARCD1Q96GM5 515 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 ZNF583Q96ND8 569 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 SMOC2Q9H3U7 446 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 RMI1Q9H9A7 625 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 GALPQ9UBC7 116 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 SUN2Q9UH99 717 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 SNX5Q9Y5X3 404 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 ZNF99A8MXY4 864 aaPredicted RBP19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 CDC7O00311 574 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 KERAO60938 352 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 NADKO95544 446 aaPredicted RBP19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 RPS17P08708 135 aaKnown RBP19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 ATXN1LP0C7T5 689 aaKnown RBP19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 CYP2C18P33260 490 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 DGKQP52824 942 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 ERVK-8P63133 956 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 FPGSQ05932 587 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 DALRD3Q5D0E6 543 aaKnown RBP19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 DPP10Q8N608 796 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 RTL3Q8N8U3 475 aaKnown RBP19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 ZNF555Q8NEP9 628 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 DNAJB3Q8WWF6 145 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 KIAA1191Q96A73 305 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 ITCHQ96J02 903 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 BTBD2Q9BX70 525 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 SMPD4Q9NXE4 827 aa19.53■□□□□ 0.72
RPUSD3-216ENST00000484134 RNF112Q9ULX5 631 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms