RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 ARMC3Q5W041 872 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 SLC30A9Q6PML9 568 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 GLT6D1Q7Z4J2 308 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 FAM129CQ86XR2 697 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 CACNA2D3Q8IZS8 1091 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 PELI3Q8N2H9 469 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 CCDC89Q8N998 374 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 BRSK1Q8TDC3 778 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 ACTRT1Q8TDG2 376 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 PATE1Q8WXA2 126 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 VPS35Q96QK1 796 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 FAM118BQ9BPY3 351 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 TBL1YQ9BQ87 522 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 GORASP1Q9BQQ3 440 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 RIOK2Q9BVS4 552 aaKnown RBP9.88□□□□□ -0.83
CPSF4-213ENST00000484112 GSDMCQ9BYG8 508 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 FRMD8Q9BZ67 464 aaPredicted RBP9.88□□□□□ -0.83
CPSF4-213ENST00000484112 B3GNT4Q9C0J1 378 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 C10orf88Q9H8K7 445 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 SLC39A1Q9NY26 324 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 TAAR2Q9P1P5 351 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 PKP3Q9Y446 797 aa9.88□□□□□ -0.83
CPSF4-213ENST00000484112 MAST4O15021 2626 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 ZFC3H1O60293 1989 aaKnown RBP9.87□□□□□ -0.83
CPSF4-213ENST00000484112 TRBV23OR9-2A0A075B6M9 112 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 GOLGA6L10A0A0M3HER8 536 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 EFCAB7A8K855 629 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 ZNF891A8MT65 544 aaPredicted RBP9.87□□□□□ -0.83
CPSF4-213ENST00000484112 PGRMC1O00264 195 aaKnown RBP9.87□□□□□ -0.83
CPSF4-213ENST00000484112 NKX2-8O15522 239 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 RAD1O60671 282 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 SUN1O94901 812 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 GAS8O95995 478 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 NTRK1P04629 796 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 CEACAM5P06731 702 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 PRKAR1AP10644 381 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 GP1BBP13224 206 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 LPOP22079 712 aaPredicted RBP9.87□□□□□ -0.83
CPSF4-213ENST00000484112 HADHAP40939 763 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 LIMK2P53671 638 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 GDF10P55107 478 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 SEMA5AQ13591 1074 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 ITGA9Q13797 1035 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 KDELC2Q7Z4H8 507 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 NRROSQ86YC3 692 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 SLC35F6Q8N357 371 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 AGBL5Q8NDL9 886 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 GPBAR1Q8TDU6 330 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 C1orf54Q8WWF1 131 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 ATG4AQ8WYN0 398 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 SCAMP4Q969E2 229 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 EID2BQ96D98 161 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 WDR24Q96S15 920 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 OSBPL9Q96SU4 736 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 FICDQ9BVA6 458 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 EIF2B3Q9NR50 452 aaKnown RBP9.87□□□□□ -0.83
CPSF4-213ENST00000484112 SMOXQ9NWM0 555 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 OCIAD1Q9NX40 245 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 TRMT1Q9NXH9 659 aaKnown RBP9.87□□□□□ -0.83
CPSF4-213ENST00000484112 IL17CQ9P0M4 197 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 CD84Q9UIB8 345 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 SNX12Q9UMY4 172 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 SHOC2Q9UQ13 582 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 PCDHGA3Q9Y5H0 932 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 LRP4O75096 1905 aa9.87□□□□□ -0.83
CPSF4-213ENST00000484112 SPTA1P02549 2419 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 A8MU76 341 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 E7EVH7 732 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 PPM1DO15297 605 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 STX7O15400 261 aaKnown RBP9.86□□□□□ -0.83
CPSF4-213ENST00000484112 DUX1O43812 170 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 VEGFDO43915 354 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 METTL18O95568 372 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 AGTP01019 485 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 IFNB1P01574 187 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 FUCA1P04066 466 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 ATP1A1P05023 1023 aaKnown RBP9.86□□□□□ -0.83
CPSF4-213ENST00000484112 BPIP17213 487 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 CXCR5P32302 372 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 SPAM1P38567 509 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 CASRP41180 1078 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 POLD2P49005 469 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 FOXK1P85037 733 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 CDK16Q00536 496 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 CDH17Q12864 832 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 MSLNQ13421 630 aaPredicted RBP9.86□□□□□ -0.83
CPSF4-213ENST00000484112 TRA2AQ13595 282 aaKnown RBP eCLIP9.86□□□□□ -0.83
CPSF4-213ENST00000484112 PTPRRQ15256 657 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 CYP1B1Q16678 543 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 SNAP47Q5SQN1 464 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 DCAF12Q5T6F0 453 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 ANKS6Q68DC2 871 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 DOK6Q6PKX4 331 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 GSTA5Q7RTV2 222 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 C17orf82Q86X59 251 aaPredicted RBP9.86□□□□□ -0.83
CPSF4-213ENST00000484112 ZNF761Q86XN6 746 aaPredicted RBP9.86□□□□□ -0.83
CPSF4-213ENST00000484112 PHYKPLQ8IUZ5 450 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 UNC5BQ8IZJ1 945 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 TTC30BQ8N4P2 665 aa9.86□□□□□ -0.83
CPSF4-213ENST00000484112 SLC25A41Q8N5S1 370 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms