RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 RRP15Q9Y3B9 282 aaKnown RBP6.89□□□□□ -1.31
BRCA1-216ENST00000484087 PSAT1Q9Y617 370 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 LRP4O75096 1905 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 BPTFQ12830 3046 aa6.89□□□□□ -1.31
BRCA1-216ENST00000484087 LAMA5O15230 3695 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 CEP295Q9C0D2 2601 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 A0A096LPK6 155 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 A0A1W2PR77 199 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 HMX2A2RU54 273 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 CCT8L1PA6NM43 557 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 C2orf81A6NN90 581 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 C16orf96A6NNT2 1141 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 A8MX80 341 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 C10orf142B7Z368 130 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 GOLGA8TH3BQL2 631 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 SCAMP1O15126 338 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 SLC7A4O43246 635 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 DCTN3O75935 186 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 PCDH8O95206 1070 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 ALDOAP04075 364 aaKnown RBP6.88□□□□□ -1.31
BRCA1-216ENST00000484087 BPGMP07738 259 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 COL6A2P12110 1019 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 CRABP2P29373 138 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 CHRNA4P43681 627 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 SLC20A2Q08357 652 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 FOXC1Q12948 553 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 PDE1CQ14123 709 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-216ENST00000484087 E2F5Q15329 346 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 SHBQ15464 509 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 CCDC157Q569K6 752 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 ZNF542PQ5EBM4 170 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 ZNF470Q6ECI4 717 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 MRNIPQ6NTE8 343 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 C6orf89Q6UWU4 347 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 CDHR3Q6ZTQ4 885 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 ERN2Q76MJ5 926 aaKnown RBP6.88□□□□□ -1.31
BRCA1-216ENST00000484087 TRPM8Q7Z2W7 1104 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 GALNT7Q86SF2 657 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 DSG4Q86SJ6 1040 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 SDCCAG8Q86SQ7 713 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-216ENST00000484087 ZC3HC1Q86WB0 502 aaKnown RBP6.88□□□□□ -1.31
BRCA1-216ENST00000484087 CAMK1DQ8IU85 385 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 PNPLA1Q8N8W4 532 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 C2CD4AQ8NCU7 369 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-216ENST00000484087 OR6P1Q8NGX9 317 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 CEP76Q8TAP6 659 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 ZNF398Q8TD17 642 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 STYXQ8WUJ0 223 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 SCG3Q8WXD2 468 aaKnown RBP6.88□□□□□ -1.31
BRCA1-216ENST00000484087 FUBP1Q96AE4 644 aaKnown RBP6.88□□□□□ -1.31
BRCA1-216ENST00000484087 ZNF778Q96MU6 729 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 GPR22Q99680 433 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 TRIM55Q9BYV6 548 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 CEP44Q9C0F1 390 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 NOD2Q9HC29 1040 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 DYRK4Q9NR20 520 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 HACD3Q9P035 362 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 SUSD2Q9UGT4 822 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 FBXO5Q9UKT4 447 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 SLC39A10Q9ULF5 831 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 RIMKLBQ9ULI2 386 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 SCML1Q9UN30 329 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 USH1CQ9Y6N9 552 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 CABIN1Q9Y6J0 2220 aa6.88□□□□□ -1.31
BRCA1-216ENST00000484087 PTPRBP23467 1997 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 A0A087X1B8 175 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 CXorf51AA0A1B0GTR3 108 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-216ENST00000484087 FAM95CA0A1B0GW59 222 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 IGLON5A6NGN9 336 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 MROH6A6NGR9 719 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 LATO43561 262 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 PLIN3O60664 434 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 MMP20O60882 483 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 H2AFYO75367 372 aaKnown RBP6.87□□□□□ -1.31
BRCA1-216ENST00000484087 TGDSO95455 350 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 IGSF6O95976 241 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 PAK4O96013 591 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-216ENST00000484087 GSRP00390 522 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 PRNPP04156 253 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 ATXN1LP0C7T5 689 aaKnown RBP6.87□□□□□ -1.31
BRCA1-216ENST00000484087 STMN1P16949 149 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 SAT1P21673 171 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 BGNP21810 368 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 GRK2P25098 689 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 ITGB7P26010 798 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 CD38P28907 300 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 HOXD12P35452 270 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 CTSKP43235 329 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 MAGEA12P43365 314 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 GRIA4P48058 902 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 ARCN1P48444 511 aaKnown RBP6.87□□□□□ -1.31
BRCA1-216ENST00000484087 AFF3P51826 1226 aaKnown RBP6.87□□□□□ -1.31
BRCA1-216ENST00000484087 PRKAA2P54646 552 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 EPHB1P54762 984 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 RAB10P61026 200 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 AP1S1P61966 158 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 SNRPD1P62314 119 aaKnown RBP6.87□□□□□ -1.31
BRCA1-216ENST00000484087 POU4F1Q01851 419 aa6.87□□□□□ -1.31
BRCA1-216ENST00000484087 ASPHQ12797 758 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms