RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 ARHGEF7Q14155 803 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 SQLEQ14534 574 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 TRMT5Q32P41 509 aaKnown RBP13.07□□□□□ -0.32
CPNE1-225ENST00000483495 KHDC1Q4VXA5 237 aaKnown RBP13.07□□□□□ -0.32
CPNE1-225ENST00000483495 ZNF805Q5CZA5 627 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 ACSBG2Q5FVE4 666 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 ARSIQ5FYB1 569 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 SNX32Q86XE0 403 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 FGF13Q92913 245 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 DCLRE1BQ9H816 532 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 CERS4Q9HA82 394 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 DZANK1Q9NVP4 752 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 ELOVL2Q9NXB9 296 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 GDE1Q9NZC3 331 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 CD274Q9NZQ7 290 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 SLC7A8Q9UHI5 535 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 TMPRSS11EQ9UL52 423 aa13.07□□□□□ -0.32
CPNE1-225ENST00000483495 NCF1BA6NI72 391 aaPredicted RBP13.06□□□□□ -0.32
CPNE1-225ENST00000483495 NCF1CA8MVU1 366 aaPredicted RBP13.06□□□□□ -0.32
CPNE1-225ENST00000483495 EIF3FO00303 357 aaPredicted RBP13.06□□□□□ -0.32
CPNE1-225ENST00000483495 E2F3O00716 465 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 UBDO15205 165 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 CCNT2O60583 730 aaKnown RBP13.06□□□□□ -0.32
CPNE1-225ENST00000483495 TRIM16O95361 564 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 CBSLP0DN79 551 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 NCF1P14598 390 aaPredicted RBP13.06□□□□□ -0.32
CPNE1-225ENST00000483495 ARSAP15289 507 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 CBSP35520 551 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 FOXA1P55317 472 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 CUL3Q13618 768 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 PTK2BQ14289 1009 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 PCBP2Q15366 365 aaKnown RBP eCLIP13.06□□□□□ -0.326e-8■■□□□ 13
CPNE1-225ENST00000483495 LRRC73Q5JTD7 316 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 MYO1HQ8N1T3 1032 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 PDPRQ8NCN5 879 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 TWIST2Q8WVJ9 160 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 CLPTM1LQ96KA5 538 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 MARK4Q96L34 752 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 C3orf30Q96M34 536 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 PANX3Q96QZ0 392 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 FAM83CQ9BQN1 747 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 NUSAP1Q9BXS6 441 aaKnown RBP13.06□□□□□ -0.32
CPNE1-225ENST00000483495 PCDH12Q9NPG4 1184 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 NKX1-2Q9UD57 310 aaPredicted RBP13.06□□□□□ -0.32
CPNE1-225ENST00000483495 G3BP2Q9UN86 482 aaKnown RBP13.06□□□□□ -0.32
CPNE1-225ENST00000483495 L3MBTL1Q9Y468 752 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 OARD1Q9Y530 152 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 TNPO3Q9Y5L0 923 aaKnown RBP13.06□□□□□ -0.32
CPNE1-225ENST00000483495 ATG2AQ2TAZ0 1938 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 A0A1B0GTL3 188 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 CIB2O75838 187 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 ESRRBO95718 433 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 ITGB6P18564 788 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 MAGEA10P43363 369 aaPredicted RBP13.06□□□□□ -0.32
CPNE1-225ENST00000483495 TTLL9Q3SXZ7 439 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 DPPA4Q7L190 304 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 HSD11B1LQ7Z5J1 315 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 PHYKPLQ8IUZ5 450 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 OR56A4Q8NGH8 313 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 NAT14Q8WUY8 206 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 ZNF382Q96SR6 550 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 PBX4Q9BYU1 374 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 TUBB1Q9H4B7 451 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 SEMA4BQ9NPR2 832 aaPredicted RBP13.06□□□□□ -0.32
CPNE1-225ENST00000483495 RAD18Q9NS91 495 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 KCTD5Q9NXV2 234 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 ZNF225Q9UK10 706 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 ASB1Q9Y576 335 aa13.06□□□□□ -0.32
CPNE1-225ENST00000483495 OTOL1A6NHN0 477 aaPredicted RBP13.05□□□□□ -0.32
CPNE1-225ENST00000483495 HEPACAM2A8MVW5 462 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 PRRT4C9JH25 899 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 PIP5K1BO14986 540 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 RAD51BO15315 384 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 FFAR2O15552 330 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 GPC4O75487 556 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 FCARP24071 287 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 ACTR3P61158 418 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 ST8SIA6P61647 398 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 RALGDSQ12967 914 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 GBX1Q14549 363 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 EIF4HQ15056 248 aaKnown RBP13.05□□□□□ -0.32
CPNE1-225ENST00000483495 PDGFRLQ15198 375 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 FRA10AC1Q70Z53 315 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 EFL1Q7Z2Z2 1120 aaKnown RBP13.05□□□□□ -0.32
CPNE1-225ENST00000483495 GPR149Q86SP6 731 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 SYVN1Q86TM6 617 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 DEFB107AQ8IZN7 70 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 KYQ8NBH2 561 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 HMGCLL1Q8TB92 370 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 NXPE3Q969Y0 559 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 HGH1Q9BTY7 390 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 FAM126AQ9BYI3 521 aaPredicted RBP13.05□□□□□ -0.32
CPNE1-225ENST00000483495 FAM83DQ9H4H8 585 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 MTG2Q9H4K7 406 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 EBF3Q9H4W6 596 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 AKTIPQ9H8T0 292 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 EBF2Q9HAK2 575 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 RDH14Q9HBH5 336 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 CDH22Q9UJ99 828 aa13.05□□□□□ -0.32
CPNE1-225ENST00000483495 PTBP2Q9UKA9 531 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms