RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 ALDH4A1P30038 563 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 TRIM23P36406 574 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 ETV5P41161 510 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 PAPOLAP51003 745 aaKnown RBP5.86□□□□□ -1.47
CSDE1-207ENST00000483407 RENBPP51606 427 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 JAM2P57087 298 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 B4GALNT1Q00973 533 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 NSUN2Q08J23 767 aaKnown RBP eCLIP5.86□□□□□ -1.47
CSDE1-207ENST00000483407 RALGDSQ12967 914 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 PTP4A2Q12974 167 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 SRSF6Q13247 344 aaKnown RBP5.86□□□□□ -1.47
CSDE1-207ENST00000483407 KCNAB2Q13303 367 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 RFTN1Q14699 578 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-207ENST00000483407 C16orf72Q14CZ0 275 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 ACOX1Q15067 660 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 SEPT7Q16181 437 aaKnown RBP5.86□□□□□ -1.47
CSDE1-207ENST00000483407 TBR1Q16650 682 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 IFI16Q16666 785 aaKnown RBP5.86□□□□□ -1.47
CSDE1-207ENST00000483407 AMZ1Q400G9 498 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 AFMIDQ63HM1 303 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 PPP1R2P3Q6NXS1 205 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 PNCKQ6P2M8 343 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 ABHD17CQ6PCB6 329 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 LIPIQ6XZB0 460 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 ZNF574Q6ZN55 896 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-207ENST00000483407 UBE2R2Q712K3 238 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-207ENST00000483407 DPPA4Q7L190 304 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 SRLQ86TD4 932 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 ZSWIM9Q86XI8 627 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 DTX1Q86Y01 620 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 PLA2G15Q8NCC3 412 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 ANKRD20A12PQ8NF67 263 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 DIO2Q92813 273 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 ECHDC3Q96DC8 303 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 CELF6Q96J87 481 aaKnown RBP5.86□□□□□ -1.47
CSDE1-207ENST00000483407 PTCHD1Q96NR3 888 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 MCEEQ96PE7 176 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 TAAR9Q96RI9 348 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 PCDHB18PQ96TA0 734 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 EIF3CQ99613 913 aaKnown RBP5.86□□□□□ -1.47
CSDE1-207ENST00000483407 CNPY3Q9BT09 278 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 KRTAP4-7Q9BYR0 210 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 SLC25A18Q9H1K4 315 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 VPS16Q9H269 839 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 GANQ9H2C0 597 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 ADNPQ9H2P0 1102 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 LRRC19Q9H756 370 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 CARS2Q9HA77 564 aaKnown RBP5.86□□□□□ -1.47
CSDE1-207ENST00000483407 SP110Q9HB58 689 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 PDFQ9HBH1 243 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 RDH14Q9HBH5 336 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 MRPL40Q9NQ50 206 aaKnown RBP5.86□□□□□ -1.47
CSDE1-207ENST00000483407 AP5S1Q9NUS5 200 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 GEMIN8Q9NWZ8 242 aaKnown RBP5.86□□□□□ -1.47
CSDE1-207ENST00000483407 ZNF281Q9Y2X9 895 aa5.86□□□□□ -1.47
CSDE1-207ENST00000483407 TDRD6O60522 2096 aaKnown RBP5.86□□□□□ -1.47
CSDE1-207ENST00000483407 PIEZO2Q9H5I5 2752 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 SPTA1P02549 2419 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-207ENST00000483407 SSU72P8A0A1W2PR75 194 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 TMEM82A0PJX8 343 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 GOLGA6CA6NDK9 693 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 GOLGA6BA6NDN3 693 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 A8MX80 341 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 DFFAO00273 331 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 B4GAT1O43505 415 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 GOLGA6DP0CG33 693 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 CYP2A6P11509 494 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-207ENST00000483407 FSTP19883 344 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 CSTF2P33240 577 aaKnown RBP eCLIP5.85□□□□□ -1.47
CSDE1-207ENST00000483407 HSPA9P38646 679 aaKnown RBP5.85□□□□□ -1.47
CSDE1-207ENST00000483407 GPR3P46089 330 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 RGRP47804 291 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 PPM1FP49593 454 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-207ENST00000483407 KLK7P49862 253 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 SCNN1BP51168 640 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 ZNF135P52742 658 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-207ENST00000483407 MAZP56270 477 aaKnown RBP5.85□□□□□ -1.47
CSDE1-207ENST00000483407 OR1D5P58170 312 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 AP1S1P61966 158 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 RPL7AP62424 266 aaKnown RBP5.85□□□□□ -1.47
CSDE1-207ENST00000483407 CYP4F2P78329 520 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 TRA2AQ13595 282 aaKnown RBP eCLIP5.85□□□□□ -1.47
CSDE1-207ENST00000483407 KCTD16Q68DU8 428 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 BORAQ6PGQ7 559 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 MON1BQ7L1V2 547 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 MTDHQ86UE4 582 aaKnown RBP5.85□□□□□ -1.47
CSDE1-207ENST00000483407 HEATR4Q86WZ0 1026 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 KIF18BQ86Y91 864 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 PLD6Q8N2A8 252 aaKnown RBP5.85□□□□□ -1.47
CSDE1-207ENST00000483407 BBS5Q8N3I7 341 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 AGBL5Q8NDL9 886 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 RCBTB1Q8NDN9 531 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 NEK11Q8NG66 645 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 CCL4L1Q8NHW4 92 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 JPH3Q8WXH2 748 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-207ENST00000483407 NUS1Q96E22 293 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 CATSPER2Q96P56 530 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 DPYSL5Q9BPU6 564 aa5.85□□□□□ -1.47
CSDE1-207ENST00000483407 NUDT22Q9BRQ3 303 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms