RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 DFNA5O60443 496 aa17.59■□□□□ 0.41
CPNE1-224ENST00000483359 NDUFS3O75489 264 aa17.59■□□□□ 0.41
CPNE1-224ENST00000483359 NSG1P42857 185 aa17.59■□□□□ 0.41
CPNE1-224ENST00000483359 RXRGP48443 463 aa17.59■□□□□ 0.41
CPNE1-224ENST00000483359 TUBB4BP68371 445 aa17.59■□□□□ 0.41
CPNE1-224ENST00000483359 CBLBQ13191 982 aa17.59■□□□□ 0.41
CPNE1-224ENST00000483359 ITIH4Q14624 930 aa17.59■□□□□ 0.41
CPNE1-224ENST00000483359 KYNUQ16719 465 aa17.59■□□□□ 0.41
CPNE1-224ENST00000483359 ZNF789Q5FWF6 425 aa17.59■□□□□ 0.41
CPNE1-224ENST00000483359 LYPLAL1Q5VWZ2 237 aa17.59■□□□□ 0.41
CPNE1-224ENST00000483359 SLC30A9Q6PML9 568 aa17.59■□□□□ 0.41
CPNE1-224ENST00000483359 SAP25Q8TEE9 199 aa17.59■□□□□ 0.41
CPNE1-224ENST00000483359 FAM122AQ96E09 287 aa17.59■□□□□ 0.41
CPNE1-224ENST00000483359 SCARF2Q96GP6 870 aaPredicted RBP17.59■□□□□ 0.41
CPNE1-224ENST00000483359 SPASTQ9UBP0 616 aa17.59■□□□□ 0.41
CPNE1-224ENST00000483359 KCNK6Q9Y257 313 aa17.59■□□□□ 0.41
CPNE1-224ENST00000483359 CRYL1Q9Y2S2 319 aa17.59■□□□□ 0.41
CPNE1-224ENST00000483359 FAM186AA6NE01 2351 aa17.58■□□□□ 0.41
CPNE1-224ENST00000483359 TCRBV9S1A1TA0A576 114 aa17.58■□□□□ 0.4
CPNE1-224ENST00000483359 OGNP20774 298 aaKnown RBP17.58■□□□□ 0.4
CPNE1-224ENST00000483359 PPARGP37231 505 aaPredicted RBP17.58■□□□□ 0.4
CPNE1-224ENST00000483359 EIF3BP55884 814 aaKnown RBP17.58■□□□□ 0.4
CPNE1-224ENST00000483359 CTBSQ01459 385 aa17.58■□□□□ 0.4
CPNE1-224ENST00000483359 TYSND1Q2T9J0 566 aa17.58■□□□□ 0.4
CPNE1-224ENST00000483359 GPR150Q8NGU9 434 aa17.58■□□□□ 0.4
CPNE1-224ENST00000483359 CALML6Q8TD86 181 aa17.58■□□□□ 0.4
CPNE1-224ENST00000483359 RMI1Q9H9A7 625 aa17.58■□□□□ 0.4
CPNE1-224ENST00000483359 DNAAF2Q9NVR5 837 aaKnown RBP17.58■□□□□ 0.4
CPNE1-224ENST00000483359 NINJ2Q9NZG7 142 aa17.58■□□□□ 0.4
CPNE1-224ENST00000483359 ZFATQ9P243 1243 aa17.58■□□□□ 0.4
CPNE1-224ENST00000483359 CFAP54Q96N23 3096 aa17.58■□□□□ 0.4
CPNE1-224ENST00000483359 GPR89AB7ZAQ6 455 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 SGTAO43765 313 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 FOXD2O60548 495 aaPredicted RBP17.57■□□□□ 0.4
CPNE1-224ENST00000483359 ACSL3O95573 720 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 GPR89BP0CG08 455 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 ZNF7P17097 686 aaPredicted RBP17.57■□□□□ 0.4
CPNE1-224ENST00000483359 ABCG1P45844 678 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 ILF3Q12906 894 aaKnown RBP eCLIP17.57■□□□□ 0.47e-7■■■■■ 35.6
CPNE1-224ENST00000483359 DEFB133Q30KQ1 61 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 PACS1Q6VY07 963 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 CEP128Q6ZU80 1094 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 TAF8Q7Z7C8 310 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 SLC25A45Q8N413 288 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 HEXDCQ8WVB3 486 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 TSPYL1Q9H0U9 437 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 OSGEPL1Q9H4B0 414 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 SLC23A2Q9UGH3 650 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 DOLKQ9UPQ8 538 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 YKT6O15498 198 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 TNFRSF8P28908 595 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 ACTR1BP42025 376 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 ACTR1AP61163 376 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 ELOCQ15369 112 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 STPG1Q5TH74 334 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 C11orf96Q7Z7L8 435 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 ALYREFQ86V81 257 aaKnown RBP17.57■□□□□ 0.4
CPNE1-224ENST00000483359 LPGAT1Q92604 370 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 KLC4Q9NSK0 619 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 TRNAU1APQ9NX07 287 aaKnown RBP17.57■□□□□ 0.4
CPNE1-224ENST00000483359 MOCS1Q9NZB8 636 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 FBXO5Q9UKT4 447 aa17.57■□□□□ 0.4
CPNE1-224ENST00000483359 CABIN1Q9Y6J0 2220 aa17.56■□□□□ 0.4
CPNE1-224ENST00000483359 IQCF5A8MTL0 148 aa17.56■□□□□ 0.4
CPNE1-224ENST00000483359 KMOO15229 486 aa17.56■□□□□ 0.4
CPNE1-224ENST00000483359 POP7O75817 140 aaKnown RBP17.56■□□□□ 0.4
CPNE1-224ENST00000483359 ITGB6P18564 788 aa17.56■□□□□ 0.4
CPNE1-224ENST00000483359 PRLHRP49683 370 aa17.56■□□□□ 0.4
CPNE1-224ENST00000483359 MGAT5Q09328 741 aa17.56■□□□□ 0.4
CPNE1-224ENST00000483359 SEPT7Q16181 437 aaKnown RBP17.56■□□□□ 0.4
CPNE1-224ENST00000483359 TEDDM1Q5T9Z0 273 aa17.56■□□□□ 0.4
CPNE1-224ENST00000483359 RNF187Q5TA31 235 aaPredicted RBP17.56■□□□□ 0.4
CPNE1-224ENST00000483359 FAM136AQ96C01 138 aa17.56■□□□□ 0.4
CPNE1-224ENST00000483359 SMYD2Q9NRG4 433 aa17.56■□□□□ 0.4
CPNE1-224ENST00000483359 PRMT5O14744 637 aaPredicted RBP17.55■□□□□ 0.4
CPNE1-224ENST00000483359 PFDN6O15212 129 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 HAUS5O94927 633 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 S1PR4O95977 384 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 FMO4P31512 558 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 PLA2G5P39877 138 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 SLMAPQ14BN4 828 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 EFTUD2Q15029 972 aaKnown RBP eCLIP17.55■□□□□ 0.46e-8■■■■□ 26.4
CPNE1-224ENST00000483359 NAPRTQ6XQN6 538 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 NRROSQ86YC3 692 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 LMNTD2Q8IXW0 634 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 FSTL5Q8N475 847 aaPredicted RBP17.55■□□□□ 0.4
CPNE1-224ENST00000483359 C2CD4AQ8NCU7 369 aaPredicted RBP17.55■□□□□ 0.4
CPNE1-224ENST00000483359 UHMK1Q8TAS1 419 aaKnown RBP17.55■□□□□ 0.4
CPNE1-224ENST00000483359 FBF1Q8TES7 1133 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 SETD7Q8WTS6 366 aaKnown RBP17.55■□□□□ 0.4
CPNE1-224ENST00000483359 ATXN7L3BQ96GX2 97 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 ZNF514Q96K75 400 aaPredicted RBP17.55■□□□□ 0.4
CPNE1-224ENST00000483359 GSDMCQ9BYG8 508 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 GPR34Q9UPC5 381 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 BTBD3Q9Y2F9 522 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 PSAT1Q9Y617 370 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 SPEGQ15772 3267 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 YY2O15391 372 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 PCDHGA12O60330 932 aa17.55■□□□□ 0.4
CPNE1-224ENST00000483359 SNX2O60749 519 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms