RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 AGAP14A8MT82 685 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 IQCF5A8MTL0 148 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 H3BM21 787 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 FFAR2O15552 330 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 GRID2O43424 1007 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 NUAK1O60285 661 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 DNAJC6O75061 913 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 CER1O95813 267 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 ZNF806P0C7X5 589 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 ATP1B2P14415 290 aaPredicted RBP13.05□□□□□ -0.32
HDAC1-208ENST00000482310 OGNP20774 298 aaKnown RBP13.05□□□□□ -0.32
HDAC1-208ENST00000482310 MCM3P25205 808 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 AK4P27144 223 aaPredicted RBP13.05□□□□□ -0.32
HDAC1-208ENST00000482310 STX2P32856 288 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 PHBP35232 272 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 PPARGP37231 505 aaPredicted RBP13.05□□□□□ -0.32
HDAC1-208ENST00000482310 HK3P52790 923 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 CSE1LP55060 971 aaKnown RBP13.05□□□□□ -0.32
HDAC1-208ENST00000482310 BNIP3Q12983 259 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 BRD3Q15059 726 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 UAP1L1Q3KQV9 507 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 KBTBD12Q3ZCT8 623 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 TEDDM1Q5T9Z0 273 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 LYPLAL1Q5VWZ2 237 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 PTRHD1Q6GMV3 140 aaKnown RBP13.05□□□□□ -0.32
HDAC1-208ENST00000482310 WDR93Q6P2C0 686 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 CNSTQ6PJW8 725 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 NAPRTQ6XQN6 538 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 LRRTM4Q86VH4 590 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 SPNS2Q8IVW8 549 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 KRT222Q8N1A0 295 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 PPM1NQ8N819 430 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 LKAAEAR1Q8TD35 194 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 DTX3LQ8TDB6 740 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 ELF4Q99607 663 aaPredicted RBP13.05□□□□□ -0.32
HDAC1-208ENST00000482310 LRRC61Q9BV99 259 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 OSGEPL1Q9H4B0 414 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 SARS2Q9NP81 518 aaKnown RBP13.05□□□□□ -0.32
HDAC1-208ENST00000482310 UCKL1Q9NWZ5 548 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 VPS18Q9P253 973 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 PSAT1Q9Y617 370 aa13.05□□□□□ -0.32
HDAC1-208ENST00000482310 PFDN6O15212 129 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 VEGFDO43915 354 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 FAM155BO75949 473 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 HAUS5O94927 633 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 IVLP07476 585 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 NME1P15531 152 aaKnown RBP13.04□□□□□ -0.32
HDAC1-208ENST00000482310 ZNF7P17097 686 aaPredicted RBP13.04□□□□□ -0.32
HDAC1-208ENST00000482310 NSG1P42857 185 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 ARRB1P49407 418 aaPredicted RBP13.04□□□□□ -0.32
HDAC1-208ENST00000482310 ITIH4Q14624 930 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 SEPT7Q16181 437 aaKnown RBP13.04□□□□□ -0.32
HDAC1-208ENST00000482310 TYSND1Q2T9J0 566 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 PYCR3Q53H96 274 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 RNF187Q5TA31 235 aaPredicted RBP13.04□□□□□ -0.32
HDAC1-208ENST00000482310 SLC30A9Q6PML9 568 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 IL27RAQ6UWB1 636 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 CERS6Q6ZMG9 384 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 PRR23CQ6ZRP0 262 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 ERMP1Q7Z2K6 904 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 STRA8Q7Z7C7 330 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 ZNF547Q8IVP9 402 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 C2CD4AQ8NCU7 369 aaPredicted RBP13.04□□□□□ -0.32
HDAC1-208ENST00000482310 ZNF548Q8NEK5 533 aaPredicted RBP13.04□□□□□ -0.32
HDAC1-208ENST00000482310 GPR150Q8NGU9 434 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 GABPB2Q8TAK5 448 aaPredicted RBP13.04□□□□□ -0.32
HDAC1-208ENST00000482310 CDKL2Q92772 493 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 ZBTB9Q96C00 473 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 SGSM3Q96HU1 749 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 NDNQ99608 321 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 MOCS1Q9NZB8 636 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 DOLKQ9UPQ8 538 aa13.04□□□□□ -0.32
HDAC1-208ENST00000482310 GOLGA4Q13439 2230 aaKnown RBP13.03□□□□□ -0.32
HDAC1-208ENST00000482310 ARID1BQ8NFD5 2236 aaPredicted RBP13.03□□□□□ -0.32
HDAC1-208ENST00000482310 IGLV3-16A0A075B6K0 115 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 A0A1B0GTQ1 180 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 POC1B-GALNT4F8VUJ3 575 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 PRMT5O14744 637 aaPredicted RBP13.03□□□□□ -0.32
HDAC1-208ENST00000482310 TNFRSF10CO14798 259 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 RIPK2O43353 540 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 SGTAO43765 313 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 GDF9O60383 454 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 SNX2O60749 519 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 NIPSNAP2O75323 286 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 SPAG6O75602 509 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 TRIM16O95361 564 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 S1PR4O95977 384 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 CSF2P04141 144 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 GSTA2P09210 222 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 SAT1P21673 171 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 CCT8P50990 548 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 BLKP51451 505 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 HNRNPKP61978 463 aaKnown RBP eCLIP13.03□□□□□ -0.32
HDAC1-208ENST00000482310 CBLBQ13191 982 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 BOP1Q14137 746 aaKnown RBP13.03□□□□□ -0.32
HDAC1-208ENST00000482310 SHBQ15464 509 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 CSRP2Q16527 193 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 ZNF423Q2M1K9 1284 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 DEFB133Q30KQ1 61 aa13.03□□□□□ -0.32
HDAC1-208ENST00000482310 CTSL3PQ5NE16 218 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms