RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 MTF2Q9Y483 593 aaPredicted RBP15.59■□□□□ 0.09
RXRA-202ENST00000481739 TNPO3Q9Y5L0 923 aaKnown RBP15.59■□□□□ 0.09
RXRA-202ENST00000481739 COPG1Q9Y678 874 aaKnown RBP15.59■□□□□ 0.09
RXRA-202ENST00000481739 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.59■□□□□ 0.09
RXRA-202ENST00000481739 DENND4AQ7Z401 1863 aa15.58■□□□□ 0.09
RXRA-202ENST00000481739 ZNF106Q9H2Y7 1883 aaKnown RBP15.58■□□□□ 0.09
RXRA-202ENST00000481739 XIRP2A4UGR9 3374 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 A0A088AWK7 358 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 LOC100653049A0A140TA62 436 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 NPEPPSL1A6NEC2 478 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 OTOL1A6NHN0 477 aaPredicted RBP15.58■□□□□ 0.08
RXRA-202ENST00000481739 UBFD1O14562 309 aaKnown RBP15.58■□□□□ 0.08
RXRA-202ENST00000481739 AZIN1O14977 448 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 BNIP3LO60238 219 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 GPC4O75487 556 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 SKAP2O75563 359 aaPredicted RBP15.58■□□□□ 0.08
RXRA-202ENST00000481739 KRT34O76011 436 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 CDK14O94921 469 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 ZNF30P17039 623 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 ITGAXP20702 1163 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 EEF1DP29692 281 aaKnown RBP15.58■□□□□ 0.08
RXRA-202ENST00000481739 GCKP35557 465 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 SLC6A11P48066 632 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 SLC25A3Q00325 362 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 CLCQ05315 142 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 RUNX3Q13761 415 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 COL19A1Q14993 1142 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 KHDC1Q4VXA5 237 aaKnown RBP15.58■□□□□ 0.08
RXRA-202ENST00000481739 PGM2L1Q6PCE3 622 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 GIMAP7Q8NHV1 300 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 DTX3LQ8TDB6 740 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 WFIKKN2Q8TEU8 576 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 MYLIPQ8WY64 445 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 FAM136AQ96C01 138 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 C19orf60Q96EN9 201 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 LRIG1Q96JA1 1093 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 CATSPER2Q96P56 530 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 TRMT61BQ9BVS5 477 aaKnown RBP15.58■□□□□ 0.08
RXRA-202ENST00000481739 DEC1Q9P2X7 70 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 FBXO10Q9UK96 956 aa15.58■□□□□ 0.08
RXRA-202ENST00000481739 NPIPB15A6NHN6 443 aaPredicted RBP15.57■□□□□ 0.08
RXRA-202ENST00000481739 MEI4A8MW99 385 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 EIF3FO00303 357 aaPredicted RBP15.57■□□□□ 0.08
RXRA-202ENST00000481739 CDC7O00311 574 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 GIPC1O14908 333 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 FKBP6O75344 327 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 PSMG1O95456 288 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 ANP32DO95626 131 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 ASLP04424 464 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 CISD3P0C7P0 127 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 DGKAP23743 735 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 NSG1P42857 185 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 PTPRRQ15256 657 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 TTLL9Q3SXZ7 439 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 C1orf146Q5VVC0 180 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 KANK2Q63ZY3 851 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 TMEM215Q68D42 235 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 METTL2BQ6P1Q9 378 aaKnown RBP15.57■□□□□ 0.08
RXRA-202ENST00000481739 CRTC1Q6UUV9 634 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 DPY19L3Q6ZPD9 716 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 MTSS1LQ765P7 747 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 SNX32Q86XE0 403 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.57■□□□□ 0.082e-7■■■■■ 278.5
RXRA-202ENST00000481739 CPNE9Q8IYJ1 553 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 NXPE1Q8N323 547 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 HCAR2Q8TDS4 363 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 ZNF483Q8TF39 744 aaPredicted RBP15.57■□□□□ 0.08
RXRA-202ENST00000481739 CYB5D2Q8WUJ1 264 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 EEF1AKMT1Q8WVE0 214 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 WDR60Q8WVS4 1066 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 SORCS1Q8WY21 1168 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 PPP1R36Q96LQ0 422 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 PANX3Q96QZ0 392 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 TACO1Q9BSH4 297 aaKnown RBP15.57■□□□□ 0.08
RXRA-202ENST00000481739 RPP25Q9BUL9 199 aaKnown RBP15.57■□□□□ 0.08
RXRA-202ENST00000481739 ZDHHC6Q9H6R6 413 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 EFCAB1Q9HAE3 211 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 MID1IP1Q9NPA3 183 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 LATS2Q9NRM7 1088 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 STX18Q9P2W9 335 aaKnown RBP15.57■□□□□ 0.08
RXRA-202ENST00000481739 SLCO3A1Q9UIG8 710 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 CHEK2O96017 543 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 CYP2A6P11509 494 aaPredicted RBP15.57■□□□□ 0.08
RXRA-202ENST00000481739 GNAZP19086 355 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 GKP32189 559 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 ACADVLP49748 655 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 SH3BP2P78314 561 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 TBL3Q12788 808 aaKnown RBP15.57■□□□□ 0.08
RXRA-202ENST00000481739 STX5Q13190 355 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 E2F5Q15329 346 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 UGT3A2Q3SY77 523 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 LRRC66Q68CR7 880 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 AAGABQ6PD74 315 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 GDPD4Q6W3E5 623 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 ZSWIM9Q86XI8 627 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 DEFB107AQ8IZN7 70 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 MYO1HQ8N1T3 1032 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 OR56A4Q8NGH8 313 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 VOPP1Q96AW1 172 aa15.57■□□□□ 0.08
RXRA-202ENST00000481739 SLC30A3Q99726 388 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms