RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 TFR2Q9UP52 801 aa13.06□□□□□ -0.32
PTPN7-212ENST00000480836 TP53TG5Q9Y2B4 290 aa13.06□□□□□ -0.32
PTPN7-212ENST00000480836 PDZK1P1A8MUH7 402 aa13.05□□□□□ -0.32
PTPN7-212ENST00000480836 APOL1O14791 398 aa13.05□□□□□ -0.32
PTPN7-212ENST00000480836 KMOO15229 486 aa13.05□□□□□ -0.32
PTPN7-212ENST00000480836 SPAG6O75602 509 aa13.05□□□□□ -0.32
PTPN7-212ENST00000480836 DNAJB5O75953 348 aa13.05□□□□□ -0.32
PTPN7-212ENST00000480836 NDST3O95803 873 aa13.05□□□□□ -0.32
PTPN7-212ENST00000480836 FGF5P12034 268 aa13.05□□□□□ -0.32
PTPN7-212ENST00000480836 AMD1P17707 334 aa13.05□□□□□ -0.32
PTPN7-212ENST00000480836 CA4P22748 312 aa13.05□□□□□ -0.32
PTPN7-212ENST00000480836 PRKD1Q15139 912 aaPredicted RBP13.05□□□□□ -0.32
PTPN7-212ENST00000480836 SIRPB2Q5JXA9 342 aa13.05□□□□□ -0.32
PTPN7-212ENST00000480836 C6orf15Q6UXA7 325 aaPredicted RBP13.05□□□□□ -0.32
PTPN7-212ENST00000480836 SLC25A41Q8N5S1 370 aa13.05□□□□□ -0.32
PTPN7-212ENST00000480836 BEND7Q8N7W2 519 aaPredicted RBP13.05□□□□□ -0.32
PTPN7-212ENST00000480836 APOBEC4Q8WW27 367 aaKnown RBP13.05□□□□□ -0.32
PTPN7-212ENST00000480836 CTNNBL1Q8WYA6 563 aaPredicted RBP13.05□□□□□ -0.32
PTPN7-212ENST00000480836 CATSPER2Q96P56 530 aa13.05□□□□□ -0.32
PTPN7-212ENST00000480836 GORASP1Q9BQQ3 440 aa13.05□□□□□ -0.32
PTPN7-212ENST00000480836 ZPBPQ9BS86 351 aa13.05□□□□□ -0.32
PTPN7-212ENST00000480836 TIMM29Q9BSF4 260 aa13.05□□□□□ -0.32
PTPN7-212ENST00000480836 TRIM55Q9BYV6 548 aa13.05□□□□□ -0.32
PTPN7-212ENST00000480836 ULBP3Q9BZM4 244 aa13.05□□□□□ -0.32
PTPN7-212ENST00000480836 IL17CQ9P0M4 197 aa13.05□□□□□ -0.32
PTPN7-212ENST00000480836 PSMD13Q9UNM6 376 aa13.05□□□□□ -0.32
PTPN7-212ENST00000480836 MAST4O15021 2626 aa13.05□□□□□ -0.32
PTPN7-212ENST00000480836 COL12A1Q99715 3063 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 SPENQ96T58 3664 aaKnown RBP13.04□□□□□ -0.32
PTPN7-212ENST00000480836 GOLGA6L3A6NEY3 463 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 ZNF487B1APH4 448 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 DDX3YO15523 660 aaKnown RBP13.04□□□□□ -0.32
PTPN7-212ENST00000480836 MTSS1O43312 755 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 POP7O75817 140 aaKnown RBP13.04□□□□□ -0.32
PTPN7-212ENST00000480836 MTA2O94776 668 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 NDUFA10O95299 355 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 KRT1P04264 644 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 NELFEP18615 380 aaKnown RBP13.04□□□□□ -0.32
PTPN7-212ENST00000480836 NFKB1P19838 968 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 CDKN2BP42772 138 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 CAPZBP47756 277 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 MARCKSL1P49006 195 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 MLLT10P55197 1068 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 WNT3AP56704 352 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 OLIG2Q13516 323 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 LAMB3Q13751 1172 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 UBAP2LQ14157 1087 aaKnown RBP13.04□□□□□ -0.32
PTPN7-212ENST00000480836 MAP7Q14244 749 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 NFE2L1Q14494 772 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 PDK1Q15118 436 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 RPE65Q16518 533 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 CRTC2Q53ET0 693 aaPredicted RBP13.04□□□□□ -0.32
PTPN7-212ENST00000480836 AGAP9Q5VTM2 703 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 CACHD1Q5VU97 1274 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 FAM69BQ5VUD6 431 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 LCN10Q6JVE6 187 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 PWWP2BQ6NUJ5 590 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 FBXO38Q6PIJ6 1188 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 WASH2PQ6VEQ5 465 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 RFX6Q8HWS3 928 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 ESX1Q8N693 406 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 SLC38A9Q8NBW4 561 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 SPDYE1Q8NFV5 336 aaPredicted RBP13.04□□□□□ -0.32
PTPN7-212ENST00000480836 OR8K1Q8NGG5 319 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 KIAA1143Q96AT1 154 aaPredicted RBP13.04□□□□□ -0.32
PTPN7-212ENST00000480836 VPS35Q96QK1 796 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 STN1Q9H668 368 aaKnown RBP13.04□□□□□ -0.32
PTPN7-212ENST00000480836 WASH6PQ9NQA3 447 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 SEMA5BQ9P283 1151 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 ANKMY1Q9P2S6 941 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 KCTD3Q9Y597 815 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 CFAP20Q9Y6A4 193 aaKnown RBP13.04□□□□□ -0.32
PTPN7-212ENST00000480836 PTPN13Q12923 2485 aa13.04□□□□□ -0.32
PTPN7-212ENST00000480836 NBASA2RRP1 2371 aa13.03□□□□□ -0.32
PTPN7-212ENST00000480836 TNRC6AQ8NDV7 1962 aaKnown RBP13.03□□□□□ -0.32
PTPN7-212ENST00000480836 NAV2Q8IVL1 2488 aa13.03□□□□□ -0.32
PTPN7-212ENST00000480836 FLNCQ14315 2725 aa13.03□□□□□ -0.32
PTPN7-212ENST00000480836 GPR89AB7ZAQ6 455 aa13.03□□□□□ -0.32
PTPN7-212ENST00000480836 SGTAO43765 313 aa13.03□□□□□ -0.32
PTPN7-212ENST00000480836 VEGFDO43915 354 aa13.03□□□□□ -0.32
PTPN7-212ENST00000480836 KATNA1O75449 491 aa13.03□□□□□ -0.32
PTPN7-212ENST00000480836 NTRK1P04629 796 aa13.03□□□□□ -0.32
PTPN7-212ENST00000480836 GPR89BP0CG08 455 aa13.03□□□□□ -0.32
PTPN7-212ENST00000480836 SLC2A4P14672 509 aa13.03□□□□□ -0.32
PTPN7-212ENST00000480836 COMTP21964 271 aa13.03□□□□□ -0.32
PTPN7-212ENST00000480836 IDSP22304 550 aa13.03□□□□□ -0.32
PTPN7-212ENST00000480836 HMGCLP35914 325 aa13.03□□□□□ -0.32
PTPN7-212ENST00000480836 RPS18P62269 152 aaKnown RBP13.03□□□□□ -0.32
PTPN7-212ENST00000480836 MSLNQ13421 630 aaPredicted RBP13.03□□□□□ -0.32
PTPN7-212ENST00000480836 PRAMEF17Q5VTA0 474 aa13.03□□□□□ -0.32
PTPN7-212ENST00000480836 PDPK2PQ6A1A2 396 aa13.03□□□□□ -0.32
PTPN7-212ENST00000480836 IRGCQ6NXR0 463 aa13.03□□□□□ -0.32
PTPN7-212ENST00000480836 DUS1LQ6P1R4 473 aaKnown RBP13.03□□□□□ -0.32
PTPN7-212ENST00000480836 PRSS42Q7Z5A4 293 aa13.03□□□□□ -0.32
PTPN7-212ENST00000480836 RHOT1Q8IXI2 618 aa13.03□□□□□ -0.32
PTPN7-212ENST00000480836 ZNF567Q8N184 647 aa13.03□□□□□ -0.32
PTPN7-212ENST00000480836 LILRA3Q8N6C8 439 aaPredicted RBP13.03□□□□□ -0.32
PTPN7-212ENST00000480836 CT55Q8WUE5 264 aa13.03□□□□□ -0.32
PTPN7-212ENST00000480836 INSM2Q96T92 566 aaPredicted RBP13.03□□□□□ -0.32
PTPN7-212ENST00000480836 MAP3K3Q99759 626 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms