RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 BPHLQ86WA6 291 aaPredicted RBP11.27□□□□□ -0.61
CCM2-213ENST00000480658 IL22RA1Q8N6P7 574 aa11.27□□□□□ -0.61
CCM2-213ENST00000480658 RCBTB1Q8NDN9 531 aa11.27□□□□□ -0.61
CCM2-213ENST00000480658 NCSTNQ92542 709 aa11.27□□□□□ -0.61
CCM2-213ENST00000480658 MED8Q96G25 268 aa11.27□□□□□ -0.61
CCM2-213ENST00000480658 CRELD1Q96HD1 420 aa11.27□□□□□ -0.61
CCM2-213ENST00000480658 SMIM14Q96QK8 99 aa11.27□□□□□ -0.61
CCM2-213ENST00000480658 CD180Q99467 661 aa11.27□□□□□ -0.61
CCM2-213ENST00000480658 ARHGAP9Q9BRR9 750 aa11.27□□□□□ -0.61
CCM2-213ENST00000480658 HEMGNQ9BXL5 484 aa11.27□□□□□ -0.61
CCM2-213ENST00000480658 RAB33BQ9H082 229 aa11.27□□□□□ -0.61
CCM2-213ENST00000480658 LRRC40Q9H9A6 602 aa11.27□□□□□ -0.61
CCM2-213ENST00000480658 IL26Q9NPH9 171 aa11.27□□□□□ -0.61
CCM2-213ENST00000480658 WDR70Q9NW82 654 aa11.27□□□□□ -0.61
CCM2-213ENST00000480658 ACSL5Q9ULC5 683 aa11.27□□□□□ -0.61
CCM2-213ENST00000480658 HEBP2Q9Y5Z4 205 aa11.27□□□□□ -0.61
CCM2-213ENST00000480658 EFCAB7A8K855 629 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 MATN2O00339 956 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 KRT86O43790 486 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 C9P02748 559 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 FGF3P11487 239 aaPredicted RBP11.26□□□□□ -0.61
CCM2-213ENST00000480658 ITGALP20701 1170 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 RBL1P28749 1068 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 MARCKSL1P49006 195 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 MC2RQ01718 297 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 MC1RQ01726 317 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 IL11RAQ14626 422 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 GPR33Q49SQ1 333 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 NKAIN2Q5VXU1 208 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 FAM151BQ6UXP7 276 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 TMPRSS9Q7Z410 1059 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 LINC00523Q86TU6 105 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 SFTPA2Q8IWL1 248 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 TTC30BQ8N4P2 665 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 SLC25A41Q8N5S1 370 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 LRRC57Q8N9N7 239 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 SEC14L1Q92503 715 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 KRT35Q92764 455 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 ART4Q93070 314 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 DCUN1D1Q96GG9 259 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 OXNAD1Q96HP4 312 aaPredicted RBP11.26□□□□□ -0.61
CCM2-213ENST00000480658 ALS2CR12Q96Q35 445 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 GOLPH3Q9H4A6 298 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 PRDM8Q9NQV8 689 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 FOXJ2Q9P0K8 574 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 EPHA6Q9UF33 1036 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 PRKAB1Q9Y478 270 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 PLEKHM1Q9Y4G2 1056 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 SPO11Q9Y5K1 396 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 BPTFQ12830 3046 aa11.26□□□□□ -0.61
CCM2-213ENST00000480658 PRR19A6NJB7 356 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 POLR1CO15160 346 aaPredicted RBP11.25□□□□□ -0.61
CCM2-213ENST00000480658 EFSO43281 561 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 MAP3K7O43318 606 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 SRP72O76094 671 aaKnown RBP11.25□□□□□ -0.61
CCM2-213ENST00000480658 MT-ND3P03897 115 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 SLC35G4P0C7Q5 338 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 HOXB3P14651 431 aaPredicted RBP11.25□□□□□ -0.61
CCM2-213ENST00000480658 STIP1P31948 543 aaKnown RBP11.25□□□□□ -0.61
CCM2-213ENST00000480658 MAPK9P45984 424 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 ADCY2Q08462 1091 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 PARP6Q2NL67 630 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 BCL7AQ4VC05 210 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 CRTC2Q53ET0 693 aaPredicted RBP11.25□□□□□ -0.61
CCM2-213ENST00000480658 RANBP10Q6VN20 620 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 PRSS42Q7Z5A4 293 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 KMT5CQ86Y97 462 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 NLGN4XQ8N0W4 816 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 ESX1Q8N693 406 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 BMPERQ8N8U9 685 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 NLGN4YQ8NFZ3 816 aaPredicted RBP11.25□□□□□ -0.61
CCM2-213ENST00000480658 ZNF398Q8TD17 642 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 UBXN4Q92575 508 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 TTC9Q92623 222 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 LINC00615Q96LM1 132 aaPredicted RBP11.25□□□□□ -0.61
CCM2-213ENST00000480658 C9orf72Q96LT7 481 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 BBC3Q96PG8 261 aaPredicted RBP11.25□□□□□ -0.61
CCM2-213ENST00000480658 TTC1Q99614 292 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 TBL1YQ9BQ87 522 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 CCM2Q9BSQ5 444 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 FAM117AQ9C073 453 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 ZNF768Q9H5H4 540 aaKnown RBP11.25□□□□□ -0.61
CCM2-213ENST00000480658 ARNT2Q9HBZ2 717 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 BPIFA1Q9NP55 256 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 SLC40A1Q9NP59 571 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 CRLS1Q9UJA2 301 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 DNAJC16Q9Y2G8 782 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 PCDHGA4Q9Y5G9 962 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 COLEC10Q9Y6Z7 277 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 RP1P56715 2156 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 ASXL3Q9C0F0 2248 aa11.25□□□□□ -0.61
CCM2-213ENST00000480658 C17orf113A0A1B0GUU1 675 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 PMS2P1A4D2B8 440 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 GRID2IPA4D2P6 1211 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 ZNF891A8MT65 544 aaPredicted RBP11.24□□□□□ -0.61
CCM2-213ENST00000480658 AP3B1O00203 1094 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 AURKAO14965 403 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 KDM1AO60341 852 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 RASSF9O75901 435 aa11.24□□□□□ -0.61
CCM2-213ENST00000480658 CCL4P13236 92 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms