RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 ILF2Q12905 390 aaKnown RBP15.96■□□□□ 0.15
VHL-203ENST00000477538 EIF2B5Q13144 721 aaKnown RBP15.96■□□□□ 0.15
VHL-203ENST00000477538 CASP8Q14790 479 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 DUOXA1Q1HG43 343 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 ALG11Q2TAA5 492 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 CTSL3PQ5NE16 218 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 RBM20Q5T481 1227 aaKnown RBP15.96■□□□□ 0.15
VHL-203ENST00000477538 KCTD16Q68DU8 428 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 LAIR1Q6GTX8 287 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 ZNF549Q6P9A3 640 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 TMEM220Q6QAJ8 160 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 CRTC3Q6UUV7 619 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 LRRTM4Q86VH4 590 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 PARGQ86W56 976 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 SPATS2Q86XZ4 545 aaKnown RBP15.96■□□□□ 0.15
VHL-203ENST00000477538 GPATCH11Q8N954 259 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 CEP76Q8TAP6 659 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 EPS8L3Q8TE67 593 aaKnown RBP15.96■□□□□ 0.15
VHL-203ENST00000477538 OR1E3Q8WZA6 343 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 TSACCQ96A04 125 aaPredicted RBP15.96■□□□□ 0.15
VHL-203ENST00000477538 SCARF2Q96GP6 870 aaPredicted RBP15.96■□□□□ 0.15
VHL-203ENST00000477538 NDNQ99608 321 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 AARSD1Q9BTE6 412 aaKnown RBP15.96■□□□□ 0.15
VHL-203ENST00000477538 DHRS4Q9BTZ2 278 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 CYP4F12Q9HCS2 524 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 ZNF180Q9UJW8 692 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 SUFUQ9UMX1 484 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 GPR34Q9UPC5 381 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 PCDHGA5Q9Y5G8 931 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 COMMD10Q9Y6G5 202 aa15.96■□□□□ 0.15
VHL-203ENST00000477538 FAM95CA0A1B0GW59 222 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 SMIM23A6NLE4 172 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 KMOO15229 486 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 GRID2O43424 1007 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 TCEA3O75764 348 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 FTH1P02794 183 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 FUCA1P04066 466 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 CFIP05156 583 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 ITGA2BP08514 1039 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 MPLP40238 635 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 GNPDA1P46926 289 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 SERPINB9P50453 376 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 PPARDQ03181 441 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 BCL7AQ4VC05 210 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 ADGRD1Q6QNK2 874 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 TAOK1Q7L7X3 1001 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 RD3Q7Z3Z2 195 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 GALNT13Q8IUC8 556 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 HID1Q8IV36 788 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 ZNF547Q8IVP9 402 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 IQCKQ8N0W5 287 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 BEND7Q8N7W2 519 aaPredicted RBP15.95■□□□□ 0.14
VHL-203ENST00000477538 ANKRD7Q92527 254 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 ELMO2Q96JJ3 720 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 ZIM3Q96PE6 472 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 ARRDC1-AS1Q9H2J1 176 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 CARS2Q9HA77 564 aaKnown RBP15.95■□□□□ 0.14
VHL-203ENST00000477538 PSMC3IPQ9P2W1 217 aaPredicted RBP15.95■□□□□ 0.14
VHL-203ENST00000477538 ZNHIT2Q9UHR6 403 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 PNMA8BQ9ULN7 279 aaPredicted RBP15.95■□□□□ 0.14
VHL-203ENST00000477538 ANKRD6Q9Y2G4 727 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 MTO1Q9Y2Z2 717 aaKnown RBP15.95■□□□□ 0.14
VHL-203ENST00000477538 PRKAB1Q9Y478 270 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 PCYT1BQ9Y5K3 369 aaPredicted RBP15.95■□□□□ 0.14
VHL-203ENST00000477538 NFS1Q9Y697 457 aa15.95■□□□□ 0.14
VHL-203ENST00000477538 ARID1BQ8NFD5 2236 aaPredicted RBP15.94■□□□□ 0.14
VHL-203ENST00000477538 IQCF5A8MTL0 148 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 RASGRF2O14827 1237 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 NIPSNAP2O75323 286 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 RASGRP1O95267 797 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 ITGB6P18564 788 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 PBLDP30039 288 aaPredicted RBP15.94■□□□□ 0.14
VHL-203ENST00000477538 SLCO1A2P46721 670 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 BMPR2Q13873 1038 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 PLA2G4EQ3MJ16 856 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 PYCR3Q53H96 274 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 HECTD2Q5U5R9 776 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 FAM45BPQ6NSW5 357 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 LRIG3Q6UXM1 1119 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 HDXQ7Z353 690 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 TDRPQ86YL5 185 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 KRT222Q8N1A0 295 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 SUMF1Q8NBK3 374 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 FAM45AQ8TCE6 357 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 LKAAEAR1Q8TD35 194 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 PANX3Q96QZ0 392 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 OR2M4Q96R27 311 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 GPR22Q99680 433 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 TSSK1BQ9BXA7 367 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 ROPN1BQ9BZX4 212 aaPredicted RBP15.94■□□□□ 0.14
VHL-203ENST00000477538 ROPN1Q9HAT0 212 aaPredicted RBP15.94■□□□□ 0.14
VHL-203ENST00000477538 FAM86C1Q9NVL1 165 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 DNAJC28Q9NX36 388 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 CTNNAL1Q9UBT7 734 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 GPSM3Q9Y4H4 160 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 DGKBQ9Y6T7 804 aa15.94■□□□□ 0.14
VHL-203ENST00000477538 GOLGA4Q13439 2230 aaKnown RBP15.94■□□□□ 0.14
VHL-203ENST00000477538 GPR179Q6PRD1 2367 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 TLDC2A0PJX2 215 aa15.93■□□□□ 0.14
VHL-203ENST00000477538 PATE3B3GLJ2 98 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms