RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 PIK3R1P27986 724 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 RCVRNP35243 200 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 ETFBP38117 255 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 STAT5AP42229 794 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 IL12RB1P42701 662 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 MAGEA11P43364 429 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 SLC1A6P48664 564 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 ALDH7A1P49419 539 aaKnown RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 CLK1P49759 484 aaKnown RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 ARSEP51690 589 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 RAD23AP54725 363 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 GPX6P59796 221 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 EIF3EP60228 445 aaKnown RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 PPP2CBP62714 309 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 PPP2CAP67775 309 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 MRPS22P82650 360 aaKnown RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 GALK2Q01415 458 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 PRKCEQ02156 737 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 GNA12Q03113 381 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 PRKCDQ05655 676 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 ZNF33BQ06732 778 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 SMARCB1Q12824 385 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 GPS1Q13098 491 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 DDR2Q16832 855 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 ALFQ53S48 1182 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 DCAF17Q5H9S7 520 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 SAMD4BQ5PRF9 694 aaKnown RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 BRMS1LQ5PSV4 323 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 CLVS2Q5SYC1 327 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 UBAP2Q5T6F2 1119 aaKnown RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 VWA5B1Q5TIE3 1220 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 LIN9Q5TKA1 542 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 SHEQ5VZ18 495 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 TTC23Q5W5X9 447 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 MBLAC2Q68D91 279 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 TAF2Q6P1X5 1199 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 PNCKQ6P2M8 343 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 C16orf86Q6ZW13 317 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 C14orf80Q86SX3 495 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 USP37Q86T82 979 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 ADCK1Q86TW2 530 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 OSTM1Q86WC4 334 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 RALGPS2Q86X27 583 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 KIF18BQ86Y91 864 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 DSELQ8IZU8 1212 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 CLEC4FQ8N1N0 589 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 SCML4Q8N228 414 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 TAB3Q8N5C8 712 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 C2orf69Q8N8R5 385 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 OR7A2PQ8NGA2 310 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 NPLOC4Q8TAT6 608 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 LRRC20Q8TCA0 184 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 URGCPQ8TCY9 931 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 TFB1MQ8WVM0 346 aaKnown RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 HDAC2Q92769 488 aaKnown RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 CCDC124Q96CT7 223 aaKnown RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 TMCO6Q96DC7 493 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 CDCA5Q96FF9 252 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 EEF2KMTQ96G04 330 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 CENPNQ96H22 339 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 PRR11Q96HE9 360 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 B3GALT6Q96L58 329 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 MAGEB10Q96LZ2 347 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 SH2D3AQ9BRG2 576 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 TMEM246Q9BRR3 403 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 MTG1Q9BT17 334 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 CCDC32Q9BV29 185 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 ADI1Q9BV57 179 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 NT5C1AQ9BXI3 368 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 INTS2Q9H0H0 1204 aaKnown RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 ADNPQ9H2P0 1102 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 PPA2Q9H2U2 334 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 PCDH12Q9NPG4 1184 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 PRDM8Q9NQV8 689 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 IARS2Q9NSE4 1012 aaKnown RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 SACM1LQ9NTJ5 587 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 SMOXQ9NWM0 555 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 RAB20Q9NX57 234 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 DUS2Q9NX74 493 aaKnown RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 PTTG3PQ9NZH4 202 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 DTLQ9NZJ0 730 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 TXNDC16Q9P2K2 825 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 TRMT6Q9UJA5 497 aaKnown RBP4.68□□□□□ -1.66
PTCD3-212ENST00000477520 MOSPD1Q9UJG1 213 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 SARDHQ9UL12 918 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 BAG5Q9UL15 447 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 POLHQ9Y253 713 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 SNX5Q9Y5X3 404 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 STON1Q9Y6Q2 735 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 UTRNP46939 3433 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 IGSF9BQ9UPX0 1349 aa4.68□□□□□ -1.66
PTCD3-212ENST00000477520 PLIN4Q96Q06 1357 aa4.67□□□□□ -1.66
PTCD3-212ENST00000477520 TRPM7Q96QT4 1865 aa4.67□□□□□ -1.66
PTCD3-212ENST00000477520 TCRBV7S2A1N4TA0A589 114 aa4.67□□□□□ -1.66
PTCD3-212ENST00000477520 HEATR9A2RTY3 570 aa4.67□□□□□ -1.66
PTCD3-212ENST00000477520 LINC00862A6NCI5 91 aa4.67□□□□□ -1.66
PTCD3-212ENST00000477520 C2orf71A6NGG8 1288 aa4.67□□□□□ -1.66
PTCD3-212ENST00000477520 DDTLA6NHG4 134 aaPredicted RBP4.67□□□□□ -1.66
PTCD3-212ENST00000477520 TSPY2A6NKD2 308 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms