RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 KRTAP10-12P60413 245 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 RPP30P78346 268 aaKnown RBP4.04□□□□□ -1.76
UBR3-209ENST00000477461 EFNB1P98172 346 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 MECOMQ03112 1051 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 CXCL9Q07325 125 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 PTP4A2Q12974 167 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 TBX2Q13207 712 aaPredicted RBP4.04□□□□□ -1.76
UBR3-209ENST00000477461 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 SERTAD4-AS1Q5TG53 156 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 CCDC70Q6NSX1 233 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 TMEM81Q6P7N7 255 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 CWC27Q6UX04 472 aaKnown RBP4.04□□□□□ -1.76
UBR3-209ENST00000477461 FOXL2NBQ6ZUU3 175 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 MARK2Q7KZI7 788 aaKnown RBP4.04□□□□□ -1.76
UBR3-209ENST00000477461 SLC26A9Q7LBE3 791 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 SATL1Q86VE3 508 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 SFR1Q86XK3 245 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 CIARTQ8N365 385 aaPredicted RBP4.04□□□□□ -1.76
UBR3-209ENST00000477461 AGBL3Q8NEM8 1001 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 FIG4Q92562 907 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 TANKQ92844 425 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 WBP2Q969T9 261 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 TEKT1Q969V4 418 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 ERGIC1Q969X5 290 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 OTULINQ96BN8 352 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 RNF125Q96EQ8 232 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 IL1RAPL1Q9NZN1 696 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 TMOD2Q9NZR1 351 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 MPP6Q9NZW5 540 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 KIAA1456Q9P272 454 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 PEMTQ9UBM1 199 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 GAB2Q9UQC2 676 aa4.04□□□□□ -1.76
UBR3-209ENST00000477461 MROH7-TTC4A0A0A0MT08 1334 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 CCDC171Q6TFL3 1326 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 ZNF541Q9H0D2 1346 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 A0A0D9SFI3 127 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 CPED1A4D0V7 1026 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 A6NLC8 198 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 TNPO2O14787 897 aaKnown RBP4.03□□□□□ -1.76
UBR3-209ENST00000477461 MBD4O95243 580 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 HEXAP06865 529 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 MCCP23508 829 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 BTDP43251 543 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 GLIPR1P48060 266 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 GMPSP49915 693 aaPredicted RBP4.03□□□□□ -1.76
UBR3-209ENST00000477461 PRELPP51888 382 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 NR1H2P55055 460 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 GALNT2Q10471 571 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 RUNX2Q13950 521 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 SOWAHAQ2M3V2 549 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 MCMDC2Q4G0Z9 681 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 ZNF667Q5HYK9 610 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 MOB3CQ70IA8 216 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 RRM2BQ7LG56 351 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 TADA2BQ86TJ2 420 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 SLC9B2Q86UD5 537 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 FAM160B2Q86V87 743 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 ARMC8Q8IUR7 673 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 EPHX4Q8IUS5 362 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 SFTPA2Q8IWL1 248 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 GPC2Q8N158 579 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 CERS5Q8N5B7 392 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 PLD5Q8N7P1 536 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 OR13A1Q8NGR1 328 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 NFKBIDQ8NI38 313 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 RFFLQ8WZ73 363 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 NSUN4Q96CB9 384 aaKnown RBP4.03□□□□□ -1.76
UBR3-209ENST00000477461 FBXO17Q96EF6 278 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 SEC62Q99442 399 aaKnown RBP4.03□□□□□ -1.76
UBR3-209ENST00000477461 MXD3Q9BW11 206 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 CRNKL1Q9BZJ0 848 aaKnown RBP4.03□□□□□ -1.76
UBR3-209ENST00000477461 NACAP1Q9BZK3 213 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 PAIP1Q9H074 479 aaKnown RBP4.03□□□□□ -1.76
UBR3-209ENST00000477461 AATFQ9NY61 560 aaKnown RBP eCLIP4.03□□□□□ -1.76
UBR3-209ENST00000477461 KCND2Q9NZV8 630 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 VDAC3Q9Y277 283 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 PSAT1Q9Y617 370 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 COL4A5P29400 1685 aa4.03□□□□□ -1.76
UBR3-209ENST00000477461 ZNF646O15015 1829 aaPredicted RBP4.02□□□□□ -1.77
UBR3-209ENST00000477461 ECM29Q5VYK3 1845 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 KDM3AQ9Y4C1 1321 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 MYH1P12882 1939 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 GPR75-ASB3A0A0A6YYF3 556 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 ZNF587BE7ETH6 402 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 C16orf97H3BN30 126 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 P2RY10O00398 339 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 GPAA1O43292 621 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 SLC22A3O75751 556 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 TMEM63AO94886 807 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 AGR2O95994 175 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 LINC00271P0C7V0 271 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 CETPP11597 493 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 PCNAP12004 261 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 SRD5A1P18405 259 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 DDIT3P35638 169 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 GABRB2P47870 512 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 TDO2P48775 406 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 UFM1P61960 85 aa4.02□□□□□ -1.77
UBR3-209ENST00000477461 DYNLL1P63167 89 aaKnown RBP4.02□□□□□ -1.77
UBR3-209ENST00000477461 TROAPQ12815 778 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms