RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 LAG3P18627 525 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 PSMD8P48556 350 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 ADARP55265 1226 aaKnown RBP16.44■□□□□ 0.22
TVP23B-202ENST00000476139 CAPRIN1Q14444 709 aaKnown RBP16.44■□□□□ 0.22
TVP23B-202ENST00000476139 RPS6KA2Q15349 733 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 FAM43BQ6ZT52 329 aaPredicted RBP16.44■□□□□ 0.22
TVP23B-202ENST00000476139 ITIH5Q86UX2 942 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 CMTM8Q8IZV2 173 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 FIBCD1Q8N539 461 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 BTBD9Q96Q07 612 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 SDR39U1Q9NRG7 319 aaPredicted RBP16.44■□□□□ 0.22
TVP23B-202ENST00000476139 MRGBPQ9NV56 204 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 SH3BP1Q9Y3L3 701 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 UNC80Q8N2C7 3258 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 PRSS51A0A1B0GVH4 220 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 ABHD14A-ACY1A0A1B0GW23 586 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 STX16O14662 325 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 TRIM16O95361 564 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 GUCA1CO95843 209 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 TRBC1P01850 177 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 ARL1P40616 181 aaPredicted RBP16.44■□□□□ 0.22
TVP23B-202ENST00000476139 PTRHD1Q6GMV3 140 aaKnown RBP16.44■□□□□ 0.22
TVP23B-202ENST00000476139 MRPS31Q92665 395 aaKnown RBP16.44■□□□□ 0.22
TVP23B-202ENST00000476139 VPS33AQ96AX1 596 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 C1orf50Q9BV19 199 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 GRIP2Q9C0E4 1043 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 CCL26Q9Y258 94 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 DHRS7Q9Y394 339 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 SMIM18P0DKX4 95 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 ATP4BP51164 291 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 ERVPABLB-1P60509 514 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 AP1S1P61966 158 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 NFATC2Q13469 925 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 GRM2Q14416 872 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 CDKN3Q16667 212 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 C6orf10Q5SRN2 563 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 ZFP1Q6P2D0 407 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 FAM217AQ8IXS0 508 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 TMEM102Q8N9M5 508 aaPredicted RBP16.44■□□□□ 0.22
TVP23B-202ENST00000476139 VOPP1Q96AW1 172 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 C1QTNF3Q9BXJ4 246 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 SLC46A2Q9BY10 475 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 LRRC3Q9BY71 257 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 NOL11Q9H8H0 719 aaKnown RBP16.44■□□□□ 0.22
TVP23B-202ENST00000476139 COQ10BQ9H8M1 238 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 SUCOQ9UBS9 1254 aaKnown RBP16.44■□□□□ 0.22
TVP23B-202ENST00000476139 LSM7Q9UK45 103 aaKnown RBP16.44■□□□□ 0.22
TVP23B-202ENST00000476139 AP4S1Q9Y587 144 aa16.44■□□□□ 0.22
TVP23B-202ENST00000476139 FGF18O76093 207 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 BPIP17213 487 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 MYBPC1Q00872 1141 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 SBSNQ6UWP8 590 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 HTR3DQ70Z44 454 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 TMC8Q8IU68 726 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 SLC22A17Q8WUG5 538 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 PPWD1Q96BP3 646 aaKnown RBP16.43■□□□□ 0.22
TVP23B-202ENST00000476139 BCAP29Q9UHQ4 241 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 GPR45Q9Y5Y3 372 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 GBF1Q92538 1859 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 HTRA2O43464 458 aaPredicted RBP16.43■□□□□ 0.22
TVP23B-202ENST00000476139 SLC25A14O95258 325 aaPredicted RBP16.43■□□□□ 0.22
TVP23B-202ENST00000476139 CLTBP09497 229 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 CD9P21926 228 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 PLEKHG6Q3KR16 790 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 LETMD1Q6P1Q0 360 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 NUDT8Q8WV74 236 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 MYLIPQ8WY64 445 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 ACDQ96AP0 544 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 SH3GL3Q99963 347 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 CORO1BQ9BR76 489 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 CLPBQ9H078 707 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 NSUN3Q9H649 340 aaKnown RBP16.43■□□□□ 0.22
TVP23B-202ENST00000476139 HCFC1R1Q9NWW0 138 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 EPS15L1Q9UBC2 864 aa16.43■□□□□ 0.22
TVP23B-202ENST00000476139 C7orf72A4D263 438 aa16.42■□□□□ 0.22
TVP23B-202ENST00000476139 TRIM43BA6NCK2 446 aa16.42■□□□□ 0.22
TVP23B-202ENST00000476139 KATNA1O75449 491 aa16.42■□□□□ 0.22
TVP23B-202ENST00000476139 MLYCDO95822 493 aa16.42■□□□□ 0.22
TVP23B-202ENST00000476139 CYBBP04839 570 aa16.42■□□□□ 0.22
TVP23B-202ENST00000476139 TXNDC11Q6PKC3 985 aa16.42■□□□□ 0.22
TVP23B-202ENST00000476139 SLCO4A1Q96BD0 722 aa16.42■□□□□ 0.22
TVP23B-202ENST00000476139 TRIM43Q96BQ3 446 aaPredicted RBP16.42■□□□□ 0.22
TVP23B-202ENST00000476139 CIB1Q99828 191 aa16.42■□□□□ 0.22
TVP23B-202ENST00000476139 SLC52A3Q9NQ40 469 aa16.42■□□□□ 0.22
TVP23B-202ENST00000476139 ABCB8Q9NUT2 735 aa16.42■□□□□ 0.22
TVP23B-202ENST00000476139 EGFL7Q9UHF1 273 aa16.42■□□□□ 0.22
TVP23B-202ENST00000476139 RANBP2P49792 3224 aaKnown RBP16.42■□□□□ 0.22
TVP23B-202ENST00000476139 NPIPB15A6NHN6 443 aaPredicted RBP16.42■□□□□ 0.22
TVP23B-202ENST00000476139 ZNF839A8K0R7 811 aa16.42■□□□□ 0.22
TVP23B-202ENST00000476139 DENRO43583 198 aaKnown RBP16.42■□□□□ 0.22
TVP23B-202ENST00000476139 CLPTM1O96005 669 aa16.42■□□□□ 0.22
TVP23B-202ENST00000476139 LRG1P02750 347 aa16.42■□□□□ 0.22
TVP23B-202ENST00000476139 TFAP2AP05549 437 aa16.42■□□□□ 0.22
TVP23B-202ENST00000476139 UROSP10746 265 aa16.42■□□□□ 0.22
TVP23B-202ENST00000476139 CKMT2P17540 419 aa16.42■□□□□ 0.22
TVP23B-202ENST00000476139 CCR2P41597 374 aa16.42■□□□□ 0.22
TVP23B-202ENST00000476139 GDF5P43026 501 aa16.42■□□□□ 0.22
TVP23B-202ENST00000476139 UFM1P61960 85 aa16.42■□□□□ 0.22
TVP23B-202ENST00000476139 CHRNA6Q15825 494 aa16.42■□□□□ 0.22
TVP23B-202ENST00000476139 MTX3Q5HYI7 312 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms