RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 IMP3Q9NV31 184 aaKnown RBP9.55□□□□□ -0.88
CDH23-211ENST00000475158 GALPQ9UBC7 116 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 ZDHHC2Q9UIJ5 367 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 HS3ST4Q9Y661 456 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 CACNA1CQ13936 2221 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 TLL1O43897 1013 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 COL6A1P12109 1028 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 CCNA2P20248 432 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 GKP32189 559 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 GDF5P43026 501 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 SIX1Q15475 284 aaPredicted RBP9.55□□□□□ -0.88
CDH23-211ENST00000475158 CEP78Q5JTW2 689 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 ARMC4Q5T2S8 1044 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 C15orf39Q6ZRI6 1047 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 AKAP14Q86UN6 197 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 GATAD2AQ86YP4 633 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 OR10Q1Q8NGQ4 319 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 OR52J3Q8NH60 311 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 TCF12Q99081 682 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 MTERF1Q99551 399 aaKnown RBP9.55□□□□□ -0.88
CDH23-211ENST00000475158 TRMOQ9BU70 441 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 AHSPQ9NZD4 102 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 RAB23Q9ULC3 237 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 LYVE1Q9Y5Y7 322 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 GVINP1Q7Z2Y8 2422 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 RP1P56715 2156 aa9.55□□□□□ -0.88
CDH23-211ENST00000475158 A0A0U1RQF3 1178 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 FAM220BPB1ANY3 271 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 GLUD1P00367 558 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 MTHFD1P11586 935 aaKnown RBP9.54□□□□□ -0.88
CDH23-211ENST00000475158 HPGDP15428 266 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 IVDP26440 423 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 MLLT6P55198 1093 aaPredicted RBP9.54□□□□□ -0.88
CDH23-211ENST00000475158 COPZ1P61923 177 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 LIPEQ05469 1076 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 INCA1Q0VD86 236 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 ZNF792Q3KQV3 632 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 TAPT1Q6NXT6 567 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 TREML1Q86YW5 311 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 TSEN34Q9BSV6 310 aaKnown RBP9.54□□□□□ -0.88
CDH23-211ENST00000475158 USP29Q9HBJ7 922 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 GABRQQ9UN88 632 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 PCDHGA4Q9Y5G9 962 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 FAM159BA6NKW6 160 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 FKTNO75072 461 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 TCEA3O75764 348 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 CCNKO75909 580 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 NOS3P29474 1203 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 CCR4P51679 360 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 AFF1P51825 1210 aaKnown RBP9.54□□□□□ -0.88
CDH23-211ENST00000475158 PURAQ00577 322 aaKnown RBP9.54□□□□□ -0.88
CDH23-211ENST00000475158 LCP2Q13094 533 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 SLC9A4Q6AI14 798 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 ZC3HC1Q86WB0 502 aaKnown RBP9.54□□□□□ -0.88
CDH23-211ENST00000475158 UBR7Q8N806 425 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 OR10A6Q8NH74 314 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 PHF21AQ96BD5 680 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 VMP1Q96GC9 406 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 TOR3AQ9H497 397 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 POLR3BQ9NW08 1133 aaPredicted RBP9.54□□□□□ -0.88
CDH23-211ENST00000475158 GMPPBQ9Y5P6 360 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 DGKBQ9Y6T7 804 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 PMF1-BGLAPU3KQ54 211 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 NUP188Q5SRE5 1749 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 TMEM88BA6NKF7 163 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.54□□□□□ -0.88
CDH23-211ENST00000475158 IFNA14P01570 189 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 GNPDA1P46926 289 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 POLR2JP52435 117 aaKnown RBP9.54□□□□□ -0.88
CDH23-211ENST00000475158 CBX2Q14781 532 aaPredicted RBP9.54□□□□□ -0.88
CDH23-211ENST00000475158 KLHL35Q6PF15 583 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 KIAA1324Q6UXG2 1013 aaKnown RBP9.54□□□□□ -0.88
CDH23-211ENST00000475158 BRSK1Q8TDC3 778 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 IRGQQ8WZA9 623 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 PROX1Q92786 737 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 RELTQ969Z4 430 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 KCNA7Q96RP8 456 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 ARHGAP39Q9C0H5 1083 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 AASDHPPTQ9NRN7 309 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 MIOSQ9NXC5 875 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 CNTN3Q9P232 1028 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 NDOR1Q9UHB4 597 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 MYH1P12882 1939 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 A0A0G2JN53 185 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 SLC38A8A6NNN8 435 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 CDC7O00311 574 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 MAGEC1O60732 1142 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 GSTT2P0CG29 244 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 GSTT2BP0CG30 244 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 DBTP11182 482 aaKnown RBP9.54□□□□□ -0.88
CDH23-211ENST00000475158 COL6A2P12110 1019 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 TRIP4Q15650 581 aaPredicted RBP9.54□□□□□ -0.88
CDH23-211ENST00000475158 CYP2A13Q16696 494 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 FAM174BQ3ZCQ3 159 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 PAGE2BQ5JRK9 111 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 METTL21CQ5VZV1 264 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 ZNF549Q6P9A3 640 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 PLEKHM3Q6ZWE6 761 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 IFNL1Q8IU54 200 aa9.54□□□□□ -0.88
CDH23-211ENST00000475158 PGAM4Q8N0Y7 254 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms