RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 ZSCAN12O43309 604 aa23.63■■□□□ 1.37
CPNE1-223ENST00000475146 POP7O75817 140 aaKnown RBP23.63■■□□□ 1.37
CPNE1-223ENST00000475146 ZSCAN5DPP0CG00 497 aa23.63■■□□□ 1.37
CPNE1-223ENST00000475146 HGFP14210 728 aa23.63■■□□□ 1.37
CPNE1-223ENST00000475146 IDSP22304 550 aa23.63■■□□□ 1.37
CPNE1-223ENST00000475146 RPL10P27635 214 aaKnown RBP23.63■■□□□ 1.37
CPNE1-223ENST00000475146 MC4RP32245 332 aa23.63■■□□□ 1.37
CPNE1-223ENST00000475146 EIF2S3P41091 472 aaKnown RBP23.63■■□□□ 1.37
CPNE1-223ENST00000475146 MAPK9P45984 424 aa23.63■■□□□ 1.37
CPNE1-223ENST00000475146 PCBP4P57723 403 aaKnown RBP23.63■■□□□ 1.37
CPNE1-223ENST00000475146 GPLD1P80108 840 aa23.63■■□□□ 1.37
CPNE1-223ENST00000475146 CDH17Q12864 832 aa23.63■■□□□ 1.37
CPNE1-223ENST00000475146 FNBP1LQ5T0N5 605 aa23.63■■□□□ 1.37
CPNE1-223ENST00000475146 DRICH1Q6PGQ1 229 aaPredicted RBP23.63■■□□□ 1.37
CPNE1-223ENST00000475146 IGF2-ASQ6U949 168 aa23.63■■□□□ 1.37
CPNE1-223ENST00000475146 SNX20Q7Z614 316 aa23.63■■□□□ 1.37
CPNE1-223ENST00000475146 AMZ2Q86W34 360 aa23.63■■□□□ 1.37
CPNE1-223ENST00000475146 DCUN1D1Q96GG9 259 aa23.63■■□□□ 1.37
CPNE1-223ENST00000475146 PRR11Q96HE9 360 aaPredicted RBP23.63■■□□□ 1.37
CPNE1-223ENST00000475146 SLC46A1Q96NT5 459 aa23.63■■□□□ 1.37
CPNE1-223ENST00000475146 KCNF1Q9H3M0 494 aa23.63■■□□□ 1.37
CPNE1-223ENST00000475146 SCHIP1Q9P0W5 487 aaPredicted RBP23.63■■□□□ 1.37
CPNE1-223ENST00000475146 JRKLQ9Y4A0 524 aa23.63■■□□□ 1.37
CPNE1-223ENST00000475146 FREM2Q5SZK8 3169 aa23.62■■□□□ 1.37
CPNE1-223ENST00000475146 CCDC78A2IDD5 438 aa23.62■■□□□ 1.37
CPNE1-223ENST00000475146 DUX1O43812 170 aa23.62■■□□□ 1.37
CPNE1-223ENST00000475146 JMJD7P0C870 316 aa23.62■■□□□ 1.37
CPNE1-223ENST00000475146 CSF2RBP32927 897 aa23.62■■□□□ 1.37
CPNE1-223ENST00000475146 DRG2P55039 364 aaKnown RBP23.62■■□□□ 1.37
CPNE1-223ENST00000475146 CCDC173Q0VFZ6 552 aa23.62■■□□□ 1.37
CPNE1-223ENST00000475146 SEMA5AQ13591 1074 aa23.62■■□□□ 1.37
CPNE1-223ENST00000475146 ZRANB3Q5FWF4 1079 aa23.62■■□□□ 1.37
CPNE1-223ENST00000475146 STYXQ8WUJ0 223 aa23.62■■□□□ 1.37
CPNE1-223ENST00000475146 ZNF514Q96K75 400 aaPredicted RBP23.62■■□□□ 1.37
CPNE1-223ENST00000475146 CMKLR1Q99788 373 aa23.62■■□□□ 1.37
CPNE1-223ENST00000475146 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.62■■□□□ 1.37
CPNE1-223ENST00000475146 NLE1Q9NVX2 485 aaPredicted RBP23.62■■□□□ 1.37
CPNE1-223ENST00000475146 AKAP7Q9P0M2 348 aaPredicted RBP23.62■■□□□ 1.37
CPNE1-223ENST00000475146 PISDQ9UG56 409 aa23.62■■□□□ 1.37
CPNE1-223ENST00000475146 DRG1Q9Y295 367 aaKnown RBP23.62■■□□□ 1.37
CPNE1-223ENST00000475146 PRR19A6NJB7 356 aa23.61■■□□□ 1.37
CPNE1-223ENST00000475146 KCNJ13O60928 360 aa23.61■■□□□ 1.37
CPNE1-223ENST00000475146 SUN1O94901 812 aa23.61■■□□□ 1.37
CPNE1-223ENST00000475146 VIPP01282 170 aa23.61■■□□□ 1.37
CPNE1-223ENST00000475146 APRTP07741 180 aa23.61■■□□□ 1.37
CPNE1-223ENST00000475146 RALBP11234 206 aa23.61■■□□□ 1.37
CPNE1-223ENST00000475146 HOXB3P14651 431 aaPredicted RBP23.61■■□□□ 1.37
CPNE1-223ENST00000475146 RPL22P35268 128 aaKnown RBP23.61■■□□□ 1.37
CPNE1-223ENST00000475146 MLLT3P42568 568 aaPredicted RBP23.61■■□□□ 1.37
CPNE1-223ENST00000475146 KCNJ1P48048 391 aa23.61■■□□□ 1.37
CPNE1-223ENST00000475146 UBE2IP63279 158 aaKnown RBP23.61■■□□□ 1.37
CPNE1-223ENST00000475146 CCDC38Q502W7 563 aa23.61■■□□□ 1.37
CPNE1-223ENST00000475146 JAMLQ86YT9 394 aa23.61■■□□□ 1.37
CPNE1-223ENST00000475146 REXO1L1PQ8IX06 675 aa23.61■■□□□ 1.37
CPNE1-223ENST00000475146 NXPE1Q8N323 547 aa23.61■■□□□ 1.37
CPNE1-223ENST00000475146 BEND7Q8N7W2 519 aaPredicted RBP23.61■■□□□ 1.37
CPNE1-223ENST00000475146 OR4D9Q8NGE8 314 aa23.61■■□□□ 1.37
CPNE1-223ENST00000475146 NAT14Q8WUY8 206 aa23.61■■□□□ 1.37
CPNE1-223ENST00000475146 TMEM159Q96B96 161 aa23.61■■□□□ 1.37
CPNE1-223ENST00000475146 SGF29Q96ES7 293 aa23.61■■□□□ 1.37
CPNE1-223ENST00000475146 NAF1Q96HR8 494 aaKnown RBP23.61■■□□□ 1.37
CPNE1-223ENST00000475146 CCDC74BQ96LY2 380 aa23.61■■□□□ 1.37
CPNE1-223ENST00000475146 DPYSL5Q9BPU6 564 aa23.61■■□□□ 1.37
CPNE1-223ENST00000475146 HOMER3Q9NSC5 361 aa23.61■■□□□ 1.37
CPNE1-223ENST00000475146 TRMT1Q9NXH9 659 aaKnown RBP23.61■■□□□ 1.37
CPNE1-223ENST00000475146 IGHV5-10-1A0A0J9YXX1 117 aa23.6■■□□□ 1.37
CPNE1-223ENST00000475146 CFAP99D6REC4 459 aa23.6■■□□□ 1.37
CPNE1-223ENST00000475146 ITGA2BP08514 1039 aa23.6■■□□□ 1.37
CPNE1-223ENST00000475146 MPSTP25325 297 aa23.6■■□□□ 1.37
CPNE1-223ENST00000475146 SLC19A1P41440 591 aa23.6■■□□□ 1.37
CPNE1-223ENST00000475146 HALP42357 657 aa23.6■■□□□ 1.37
CPNE1-223ENST00000475146 ABCG1P45844 678 aa23.6■■□□□ 1.37
CPNE1-223ENST00000475146 BASP1P80723 227 aaKnown RBP23.6■■□□□ 1.37
CPNE1-223ENST00000475146 COL28A1Q2UY09 1125 aa23.6■■□□□ 1.37
CPNE1-223ENST00000475146 AGAP9Q5VTM2 703 aa23.6■■□□□ 1.37
CPNE1-223ENST00000475146 ABRAXAS1Q6UWZ7 409 aa23.6■■□□□ 1.37
CPNE1-223ENST00000475146 WASH2PQ6VEQ5 465 aa23.6■■□□□ 1.37
CPNE1-223ENST00000475146 ZNF574Q6ZN55 896 aaPredicted RBP23.6■■□□□ 1.37
CPNE1-223ENST00000475146 MICALCLQ6ZW33 695 aa23.6■■□□□ 1.37
CPNE1-223ENST00000475146 RCBTB1Q8NDN9 531 aa23.6■■□□□ 1.37
CPNE1-223ENST00000475146 ZNF248Q8NDW4 579 aa23.6■■□□□ 1.37
CPNE1-223ENST00000475146 CXorf40BQ96DE9 158 aa23.6■■□□□ 1.37
CPNE1-223ENST00000475146 COPS8Q99627 209 aa23.6■■□□□ 1.37
CPNE1-223ENST00000475146 WASH6PQ9NQA3 447 aa23.6■■□□□ 1.37
CPNE1-223ENST00000475146 TMEM9Q9P0T7 183 aa23.6■■□□□ 1.37
CPNE1-223ENST00000475146 ZNF624Q9P2J8 865 aaPredicted RBP23.6■■□□□ 1.37
CPNE1-223ENST00000475146 DNMT3AQ9Y6K1 912 aaPredicted RBP23.6■■□□□ 1.37
CPNE1-223ENST00000475146 OR52A4PA6NMU1 304 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 AGAP14A8MT82 685 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 H7C0S8 307 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 BRAFP15056 766 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 XRCC1P18887 633 aaPredicted RBP23.59■■□□□ 1.37
CPNE1-223ENST00000475146 ITPKBP27987 946 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 GRIA1P42261 906 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 LIMK2P53671 638 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 EPHA4P54764 986 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 CFHR1Q03591 330 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 DMPKQ09013 629 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 SQSTM1Q13501 440 aa23.59■■□□□ 1.37
CPNE1-223ENST00000475146 NFE2L1Q14494 772 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms