RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 SNX24Q9Y343 169 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 PRKAB1Q9Y478 270 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 TEX264Q9Y6I9 313 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 FAM169AQ9Y6X4 670 aa16.68■□□□□ 0.26
SCAF11-206ENST00000474828 SPAARA0A1B0GVQ0 90 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 CCDC78A2IDD5 438 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 CFAP99D6REC4 459 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 FTH1P19P0C7X4 201 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 RALBP11234 206 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 PNLIPP16233 465 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 ACTR1BP42025 376 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 RPIAP49247 311 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 ADARP55265 1226 aaKnown RBP16.67■□□□□ 0.26
SCAF11-206ENST00000474828 ACTR1AP61163 376 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 PRAMEP78395 509 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 SIM1P81133 766 aaPredicted RBP16.67■□□□□ 0.26
SCAF11-206ENST00000474828 GTF2H3Q13889 308 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 TMEM220Q6QAJ8 160 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 CHST15Q7LFX5 561 aaPredicted RBP16.67■□□□□ 0.26
SCAF11-206ENST00000474828 CCNJLQ8IV13 435 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 PDIK1LQ8N165 341 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 CACTIN-AS1Q8N1I8 211 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 GDAP1Q8TB36 358 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 ADAMTS14Q8WXS8 1223 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 GLMNQ92990 594 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 ART4Q93070 314 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 SGF29Q96ES7 293 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 TTC25Q96NG3 672 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 TCF12Q99081 682 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 RAB17Q9H0T7 212 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 MARCH4Q9P2E8 410 aaPredicted RBP16.67■□□□□ 0.26
SCAF11-206ENST00000474828 TBC1D29Q9UFV1 150 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 ANAPC5Q9UJX4 755 aa16.67■□□□□ 0.26
SCAF11-206ENST00000474828 FAM221BA6H8Z2 402 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 MGAT4DA6NG13 374 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 QSOX1O00391 747 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 CD3EAPO15446 510 aaKnown RBP16.66■□□□□ 0.26
SCAF11-206ENST00000474828 NUDT21O43809 227 aaKnown RBP16.66■□□□□ 0.26
SCAF11-206ENST00000474828 POP7O75817 140 aaKnown RBP16.66■□□□□ 0.26
SCAF11-206ENST00000474828 VAPBO95292 243 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 TRIM16O95361 564 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 TTC4O95801 387 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 EML2O95834 649 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 ACP5P13686 325 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 PGAM1P18669 254 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 FASLGP48023 281 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 TTPAP49638 278 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 TERF1P54274 439 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 MRPS25P82663 173 aaKnown RBP16.66■□□□□ 0.26
SCAF11-206ENST00000474828 CAV1Q03135 178 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 DHX9Q08211 1270 aaKnown RBP16.66■□□□□ 0.26
SCAF11-206ENST00000474828 DNAJC3Q13217 504 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 NR0B2Q15466 257 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 HIF1AQ16665 826 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 C14orf28Q4W4Y0 310 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 GLE1Q53GS7 698 aaKnown RBP16.66■□□□□ 0.26
SCAF11-206ENST00000474828 FASTKD1Q53R41 847 aaKnown RBP16.66■□□□□ 0.26
SCAF11-206ENST00000474828 DNAJC21Q5F1R6 531 aaKnown RBP16.66■□□□□ 0.26
SCAF11-206ENST00000474828 AARS2Q5JTZ9 985 aaKnown RBP16.66■□□□□ 0.26
SCAF11-206ENST00000474828 METRNLQ641Q3 311 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 STEAP4Q687X5 459 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 IYDQ6PHW0 289 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 SLC30A9Q6PML9 568 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 RAB44Q7Z6P3 723 aaPredicted RBP16.66■□□□□ 0.26
SCAF11-206ENST00000474828 AMZ2Q86W34 360 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 IGDCC3Q8IVU1 814 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 LMNTD2Q8IXW0 634 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 SFRP1Q8N474 314 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 KYQ8NBH2 561 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 NOA1Q8NC60 698 aaKnown RBP16.66■□□□□ 0.26
SCAF11-206ENST00000474828 OR6P1Q8NGX9 317 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 OR2L2Q8NH16 312 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 NAT6Q93015 286 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 STAMBPL1Q96FJ0 436 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 TRIM56Q9BRZ2 755 aaKnown RBP16.66■□□□□ 0.26
SCAF11-206ENST00000474828 LRRC1Q9BTT6 524 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 CATSPERZQ9NTU4 200 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 EVA1BQ9NVM1 165 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 SAMD15Q9P1V8 674 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 PADI4Q9UM07 663 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 DOLKQ9UPQ8 538 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 APOBEC2Q9Y235 224 aaKnown RBP16.66■□□□□ 0.26
SCAF11-206ENST00000474828 UTP11Q9Y3A2 253 aaKnown RBP16.66■□□□□ 0.26
SCAF11-206ENST00000474828 RPS6KL1Q9Y6S9 549 aa16.66■□□□□ 0.26
SCAF11-206ENST00000474828 CTAGE15A4D2H0 777 aa16.65■□□□□ 0.26
SCAF11-206ENST00000474828 OR5K4A6NMS3 321 aa16.65■□□□□ 0.26
SCAF11-206ENST00000474828 POLBP06746 335 aa16.65■□□□□ 0.26
SCAF11-206ENST00000474828 CTAGE8P0CG41 777 aa16.65■□□□□ 0.26
SCAF11-206ENST00000474828 F3P13726 295 aa16.65■□□□□ 0.26
SCAF11-206ENST00000474828 GLB1P16278 677 aa16.65■□□□□ 0.26
SCAF11-206ENST00000474828 PAMP19021 973 aa16.65■□□□□ 0.26
SCAF11-206ENST00000474828 OGNP20774 298 aaKnown RBP16.65■□□□□ 0.26
SCAF11-206ENST00000474828 AKT1P31749 480 aa16.65■□□□□ 0.26
SCAF11-206ENST00000474828 ARL4CP56559 192 aa16.65■□□□□ 0.26
SCAF11-206ENST00000474828 N4BP2L1Q5TBK1 243 aaPredicted RBP16.65■□□□□ 0.26
SCAF11-206ENST00000474828 CES3Q6UWW8 571 aa16.65■□□□□ 0.26
SCAF11-206ENST00000474828 ZDHHC24Q6UX98 284 aa16.65■□□□□ 0.26
SCAF11-206ENST00000474828 TAS2R42Q7RTR8 314 aa16.65■□□□□ 0.26
SCAF11-206ENST00000474828 CTAGE6Q86UF2 777 aa16.65■□□□□ 0.26
SCAF11-206ENST00000474828 TRAPPC5Q8IUR0 188 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms