RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, human

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSS-208	ENST00000474319	RGR	P47804	291 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	HCAR3	P49019	387 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	BMX	P51813	675 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	RAD23A	P54725	363 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	FAM171A1	Q5VUB5	890 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	MRNIP	Q6NTE8	343 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	GCNT7	Q6ZNI0	430 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	BNIPL	Q7Z465	357 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	PIANP	Q8IYJ0	282 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	DDHD1	Q8NEL9	900 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	ITFG1	Q8TB96	612 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	TMBIM1	Q969X1	311 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	LINGO1	Q96FE5	620 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	PRKD2	Q9BZL6	878 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	AGPAT4	Q9NRZ5	378 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	PLK2	Q9NYY3	685 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	MYO1G	B0I1T2	1018 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	LDB2	O43679	373 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	GMNN	O75496	209 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	ADSL	P30566	484 aa	Predicted RBP	10.63	□□□□□ -0.71
LSS-208	ENST00000474319	MTHFR	P42898	656 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	POLR2J	P52435	117 aa	Known RBP	10.63	□□□□□ -0.71
LSS-208	ENST00000474319	CASP9	P55211	416 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	DNAJB13	P59910	316 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	RPS24	P62847	133 aa	Known RBP	10.63	□□□□□ -0.71
LSS-208	ENST00000474319	GTF2H3	Q13889	308 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	SIM2	Q14190	667 aa	Predicted RBP	10.63	□□□□□ -0.71
LSS-208	ENST00000474319	TIGD7	Q6NT04	549 aa	Predicted RBP	10.63	□□□□□ -0.71
LSS-208	ENST00000474319	FRA10AC1	Q70Z53	315 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	CNTN4	Q8IWV2	1026 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	TRPV3	Q8NET8	790 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	EGFL8	Q99944	293 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	ABCC13	Q9NSE7	274 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	FKBPL	Q9UIM3	349 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	NEU3	Q9UQ49	428 aa		10.63	□□□□□ -0.71
LSS-208	ENST00000474319	ASPDH	A6ND91	283 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	DFNA5	O60443	496 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	B4GALT3	O60512	393 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	CAPN1	P07384	714 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	RPL38	P63173	70 aa	Known RBP	10.62	□□□□□ -0.71
LSS-208	ENST00000474319	UPP1	Q16831	310 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	CYBRD1	Q53TN4	286 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	MS4A13	Q5J8X5	152 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	OTOP2	Q7RTS6	562 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	GLT6D1	Q7Z4J2	308 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	R3HCC1L	Q7Z5L2	792 aa	Known RBP	10.62	□□□□□ -0.71
LSS-208	ENST00000474319	LGI2	Q8N0V4	545 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	CLDN19	Q8N6F1	224 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	SEPT8	Q92599	483 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	TMEM125	Q96AQ2	219 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	PLEKHA8	Q96JA3	519 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	CCSER2	Q9H7U1	834 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	VPS45	Q9NRW7	570 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	FARSB	Q9NSD9	589 aa	Known RBP	10.62	□□□□□ -0.71
LSS-208	ENST00000474319	SLC38A7	Q9NVC3	462 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	SMPD4	Q9NXE4	827 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	PLXNB2	O15031	1838 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319		H0Y626	953 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	TRIM16	O95361	564 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	BCL10	O95999	233 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	CHEK2	O96017	543 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	MMP2	P08253	660 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	BMP2	P12643	396 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	TGFBR1	P36897	503 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	CAPG	P40121	348 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	MLLT10	P55197	1068 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	MLLT6	P55198	1093 aa	Predicted RBP	10.62	□□□□□ -0.71
LSS-208	ENST00000474319	ADAM17	P78536	824 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	TLE2	Q04725	743 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	TRAP1	Q12931	704 aa	Known RBP	10.62	□□□□□ -0.71
LSS-208	ENST00000474319	DNASE1L3	Q13609	305 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	SPIDR	Q14159	915 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	TGFBI	Q15582	683 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	RAB41	Q5JT25	222 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	ARMC12	Q5T9G4	340 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	FAM45BP	Q6NSW5	357 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	PSAPL1	Q6NUJ1	521 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	MBOAT1	Q6ZNC8	495 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	THEM5	Q8N1Q8	247 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	ANKFN1	Q8N957	763 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	SMYD1	Q8NB12	490 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	FAM45A	Q8TCE6	357 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	FRS2	Q8WU20	508 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	FBXO32	Q969P5	355 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	IMP4	Q96G21	291 aa	Known RBP	10.62	□□□□□ -0.71
LSS-208	ENST00000474319	RMI1	Q9H9A7	625 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	SACM1L	Q9NTJ5	587 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	ZSWIM8	A7E2V4	1837 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	TMEM247	A6NEH6	219 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	AXIN1	O15169	862 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	HMOX2	P30519	316 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	CCT8	P50990	548 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	OCA2	Q04671	838 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	ADRM1	Q16186	407 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	TAF12	Q16514	161 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	CENPS	Q8N2Z9	138 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	FAM162A	Q96A26	154 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	RHNO1	Q9BSD3	238 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	ZYG11B	Q9C0D3	744 aa		10.62	□□□□□ -0.71
LSS-208	ENST00000474319	LHPP	Q9H008	270 aa		10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms