RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 DEPDC7Q96QD5 511 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 SYBUQ9NX95 663 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 TBC1D29Q9UFV1 150 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 SLC2A6Q9UGQ3 507 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 CLCA2Q9UQC9 943 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 MSRB2Q9Y3D2 182 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 RNF215Q9Y6U7 377 aa13.54□□□□□ -0.24
USF1-205ENST00000473969 TRBV5-4A0A0C4DH59 114 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 OR51F1A6NGY5 319 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 SMAPO00193 183 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 QSOX1O00391 747 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 TMEM63AO94886 807 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 CA5AP35218 305 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 NSG1P42857 185 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 PTGIRP43119 386 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 CDKN1CP49918 316 aaPredicted RBP13.53□□□□□ -0.24
USF1-205ENST00000473969 CTSCP53634 463 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 INSM1Q01101 510 aaPredicted RBP13.53□□□□□ -0.24
USF1-205ENST00000473969 ACVR1Q04771 509 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 SEPT7Q16181 437 aaKnown RBP13.53□□□□□ -0.24
USF1-205ENST00000473969 DNAJC21Q5F1R6 531 aaKnown RBP13.53□□□□□ -0.24
USF1-205ENST00000473969 IZUMO3Q5VZ72 239 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 IYDQ6PHW0 289 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 SDCCAG8Q86SQ7 713 aaPredicted RBP13.53□□□□□ -0.24
USF1-205ENST00000473969 HOOK3Q86VS8 718 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 ZNF547Q8IVP9 402 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 BEND7Q8N7W2 519 aaPredicted RBP13.53□□□□□ -0.24
USF1-205ENST00000473969 NAT8LQ8N9F0 302 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 SPATA4Q8NEY3 305 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 ZNF778Q96MU6 729 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 SERPINB12Q96P63 405 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 GFM1Q96RP9 751 aaKnown RBP13.53□□□□□ -0.24
USF1-205ENST00000473969 SLC38A3Q99624 504 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 KIFC1Q9BW19 673 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.53□□□□□ -0.24
USF1-205ENST00000473969 ZMYND15Q9H091 742 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 PRDM8Q9NQV8 689 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 CATSPERZQ9NTU4 200 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 SLC23A2Q9UGH3 650 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 KLK13Q9UKR3 277 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 SOX13Q9UN79 622 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 ST14Q9Y5Y6 855 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 MAD1L1Q9Y6D9 718 aa13.53□□□□□ -0.24
USF1-205ENST00000473969 LRP4O75096 1905 aa13.52□□□□□ -0.24
USF1-205ENST00000473969 DNAH14Q0VDD8 3507 aa13.52□□□□□ -0.24
USF1-205ENST00000473969 ARID1BQ8NFD5 2236 aaPredicted RBP13.52□□□□□ -0.24
USF1-205ENST00000473969 SPTBN2O15020 2390 aa13.52□□□□□ -0.24
USF1-205ENST00000473969 FAM149AA5PLN7 773 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 FAM187AA6NFU0 413 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 MGAT4DA6NG13 374 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 EFCAB8A8MWE9 144 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 FANCGO15287 622 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 TTI1O43156 1089 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 AVILO75366 819 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 TCEA3O75764 348 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 AP2A2O94973 939 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 VIPP01282 170 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 RPLP0P05388 317 aaKnown RBP13.52□□□□□ -0.25
USF1-205ENST00000473969 RPL10P27635 214 aaKnown RBP13.52□□□□□ -0.25
USF1-205ENST00000473969 NMBRP28336 390 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 ALDH4A1P30038 563 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 FOXN2P32314 431 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 GPR3P46089 330 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 HHEXQ03014 270 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 DBN1Q16643 649 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 BCL7AQ4VC05 210 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 RNASEH2BQ5TBB1 312 aaKnown RBP13.52□□□□□ -0.25
USF1-205ENST00000473969 RBM44Q6ZP01 1051 aaKnown RBP13.52□□□□□ -0.25
USF1-205ENST00000473969 ZNF534Q76KX8 674 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 CAND1Q86VP6 1230 aaKnown RBP13.52□□□□□ -0.25
USF1-205ENST00000473969 C17orf82Q86X59 251 aaPredicted RBP13.52□□□□□ -0.25
USF1-205ENST00000473969 CCNJLQ8IV13 435 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 SFTPA2Q8IWL1 248 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 PIANPQ8IYJ0 282 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 CACTIN-AS1Q8N1I8 211 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 SFRP1Q8N474 314 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 BBOF1Q8ND07 529 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 OR2L2Q8NH16 312 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 PATE1Q8WXA2 126 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 CXorf40BQ96DE9 158 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 SNF8Q96H20 258 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 AHCYL2Q96HN2 611 aaKnown RBP13.52□□□□□ -0.25
USF1-205ENST00000473969 SGSM3Q96HU1 749 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 TSSK1BQ9BXA7 367 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 TRIM31Q9BZY9 425 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 LRRN3Q9H3W5 708 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 SARS2Q9NP81 518 aaKnown RBP13.52□□□□□ -0.25
USF1-205ENST00000473969 CDC23Q9UJX2 597 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 ACSL5Q9ULC5 683 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 DCHS1Q96JQ0 3298 aa13.52□□□□□ -0.25
USF1-205ENST00000473969 IGLV3-16A0A075B6K0 115 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 FAM221BA6H8Z2 402 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 CD3EAPO15446 510 aaKnown RBP13.51□□□□□ -0.25
USF1-205ENST00000473969 NDUFS3O75489 264 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 VAPBO95292 243 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 FTH1P02794 183 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 GSTM1P09488 218 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 OR56A5P0C7T3 313 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 PRSS56P0CW18 603 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 FASLGP48023 281 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms